Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04325 ATGAGTTTGAATTCATTTCGCTCCTCCTTAGCCCCCAATTCCAAACGAGTTTCTTCCAATCGATCCAATGATAACAGCAACAACAGCAAGAGGAAGAAGCAGAAGACCACCGCCACAACCACCAACCAGAAAACCTTAGGCGTCGCCTGGGGATCCAATTCCCGAAAACCTCCCTCCTCCGATTTCGGCAGTTATATGACAGAGAAGAATCGGAAACTACACAATCAGTTTAACGCCGATGCTTCCACGTCTTTGTTTAGCGGCTCTACCTCCGGGAAGCCTATATTTGCCGGAGTTTCGATTTTTGTTGACGGTTTCACCGTTCCTTCCAGTCAGGAACTGCGAAGCTACATGATAAAGTATGGTGGAAGATTTGAGAATTATTTCTCAAGGCATCGTGTAACACATATCATCTGCAGCAATCTTCCTAACAGTAAAATTAAGAACCTCAGATCTTTCAGTGCAGGGCTTCCGGTGGTAAAACCTACTTGGATTTTAGATTCTGTCGCGTCTAATAAACTCTTGACATGGATGCCTTATCAACTTGAACAGCTTTCTTCAAATAAACAACCAAAACTGTCCACATTCTTCTCATCGAGAAGTAGAAAAAATTTGGAGGATACTTTTATTAACTCCCTTTGTCAAGTAGAGACAGACGTTGAAGATTCACTTGCTAGTGTTGGCAAATCAGAGGATACTTTTACTAACACCCTTTGTCAAGTAGAGCCAGACATTGAAGATTCACTTGCTAGTGTTGGCAAATCAGAGGATAGACATTCACCCAAAGTTGGGGAGGCGGTTGAATCTAGAAGGGAAACCAGTATTGAAGCTGACGATACTGTCCTGGAGAATACTGATGCAGTTGTGATGGAAGAGCATCTGGCTAGAGTTGGAGTTAAATATGATGACGAAGATCTAGCAGGAGGAAGCAATGGTGCCGCTAATGATGAGAAAAACTTCCAAGGTGAACTTGAACCTAATTGTCAAGAACCTTCTACATCTGTTAGAAGTCTTTGTGCAGATGACCAGAATGTAAACGGATTTCCAAGTTCTGCCTCCATCAGGCCTTCTAAACAGTGTCATTCAACTCTTTCAGATCCTAATTTTGTGGAAAATTATTTCAAGAACTCACGGCTACACTTCATTGGAACATGGAGAAATCGGTATCGGAAGCGCTTTCCTATCTCGTCTTCTGGGTTCAACAATGAAATTTCTAATATCAATGCCTCTAGTACTTCTGGGAATTCAGTTGTTATCCATGTTGACATGGATTGCTTTTTTGTCGCAGTGGTTATCAGGAACCACCCTGAATTGTTGGACAAGCCTGTAGCAGTCTGCCACTCGGATAACTCTAAGGGAACTTCTGAGATTTCCTCTGCAAACTACCCAGCTCGTAGTTATGGTATTAAGGCTGGCATGTTTGTTCGAGATGCCAGGGCTCTTTGTCCCCACCTTGTTATCGTTCCATACAACTTTGAAGCTTATGAGGAAGTAGCTGATCAATTTTATAGTATATTGCATCGACATTGCAACAAAGTGCAGGCTGTGAGCTGTGATGAAGCATATTTAGATGTCACCCACTCAAAGGTTGAAGATCCTGAACTTTTAGCATCATCAATTAGGAAAGAGATCTATGAGACCACTGGATGTACAGCCAGTGTTGGCATAGCTGGAAACATGCTTATGGCCCGTATTGCTACCAGAACTGCTAAACCAAACGGTCAATATCATATAACTCTAGAAAGGGTTGAAGATCATTTACGTCAACTCCCAATTAATGCACTTCCTGGAGTGGGGCATGTTTTACAGGAAAAATTGAAGAAGCAGACTGTTCAAACATGCGGCCAATTGATGATGATTTCCAAGGTCTCACTGCAGAAGGACTATGGAATGAAAACTGGAGAAATGCTGTGGAATTATAGCAGAGGAATTGATAACCGGTTGGTTGGAGATTTTCAGGAATGTAAGTCTATTGGGGCTGATGTAAATTGGGGTGTGAGGTTCAAAGATATGAAAGATTGTGAGAACTTCCTCACAAACCTTTGCAAGGAGGTTTCATTAAGATTGCAAAGTTCTGGCATGCAAGGGCGCACATTCTCTCTCAAGATCAAAAAGAGAAAAAAAGATGCCGATGAACCTGTGAAGTTTATGGGCTGTGGAGACTGTGAAAATTTGAGTCACTCAGAAACGATTCCTGTTGCCACTGATAATGTGGAAGTACTCCAAAGGATAGCGAAACAGCTTTTTGGAAATTTTTACATAGATGTCAAGCAGATCCGAGGTATTGGCTTGCATGTTTCCAGACTTGAAAGCAGCGAGACATCTAAGCAAGGTGCAGAAAAATATAATTTGAAATCATGGCTCACTTCAGGACCTGCAAGTATGGATAAACGGAAACATCCTACAGGTCTTGACAAGAAGAACGCGGATGGCCCTTCGGTTCATGAATATGGAAATTTGCCAGGGTCTTCAGTTCCAATGGAAAATAACATACAAGATAACCAAGCTAGAGCTGACGTGAGTTTAACAACACCTCCTTTGGATATCCTTGATATGGAAGTTATGAGAAATCTTCCCCCAGAATTATTTTCAGAATTCAATAAAGTTTATGGAGGGAAGTTAGCTGATTATATTACTAAAGGGAAAGGTATAAGTGAGAATTCTAGCGCTTTACGAAACTCTCTTTTGGAAAAAGAAGCAATAAAAAAGAAAGAGGAGCTTTTGGATGTCGAGCCGATTCTTCAAAAAAAGCCATTATCTGAGATCGAGGCAATGCAACATGAGGCAGAAGGAGGTGAAGTTGTACCTGATTCAGTGTCTGAACCCTCTTTTAACGTCACTCACAAATCAAGTTTTGAAAAAGATGATTTATTGCCTGCTTCTTTAAGTCAACTTGACGGCTCTGTATTACAAGAATTGCCCGAAGATTTGAAAGCAGACATTGTTCTGCAGCTTCCTGCACACAGGAAACAAGAGATTTGCTCCAATGTTGCTGTGGTCCCTCCTAGTGAAAACTATCAGGTGTCAACAGGTGTCAACGATTCTGAGAATCTTAGATCAAATCATGCTCTGAATGAATGTCTTTGGGCTGGGAATCCTCCAAAATGGGTGGAGGAGTTCAAAATCAGCAGTTGCTTAGTATTAAAGAAACTTGCTGAAATTTATTATAAATCTGGGTTGACTAGCACCTTATCATCAGTTTTACACCAGATTATATCTGAATTCCACCAGCTAAATCTAGTCCATCACATTTCCGATGACTCTGTTAACATCACATGTGAGCTACTGAAGCAATATATCAAAGTGAAGATAGGAAAAGATATTGAGGAGATTTATATTTGTTTTCGGCTTTTGAAAAGGTTTGCAGCAGCATCACAATTTTTCCTACAAGTGTATAATAATGTATTTCCATACCTTCAGGTATACCTTATCAACCAAACAAGACATCATGAAAATAGGGTGGAAATCAGGAGGGGTGTATGGTAG 3486 0.4091 MSLNSFRSSLAPNSKRVSSNRSNDNSNNSKRKKQKTTATTTNQKTLGVAWGSNSRKPPSSDFGSYMTEKNRKLHNQFNADASTSLFSGSTSGKPIFAGVSIFVDGFTVPSSQELRSYMIKYGGRFENYFSRHRVTHIICSNLPNSKIKNLRSFSAGLPVVKPTWILDSVASNKLLTWMPYQLEQLSSNKQPKLSTFFSSRSRKNLEDTFINSLCQVETDVEDSLASVGKSEDTFTNTLCQVEPDIEDSLASVGKSEDRHSPKVGEAVESRRETSIEADDTVLENTDAVVMEEHLARVGVKYDDEDLAGGSNGAANDEKNFQGELEPNCQEPSTSVRSLCADDQNVNGFPSSASIRPSKQCHSTLSDPNFVENYFKNSRLHFIGTWRNRYRKRFPISSSGFNNEISNINASSTSGNSVVIHVDMDCFFVAVVIRNHPELLDKPVAVCHSDNSKGTSEISSANYPARSYGIKAGMFVRDARALCPHLVIVPYNFEAYEEVADQFYSILHRHCNKVQAVSCDEAYLDVTHSKVEDPELLASSIRKEIYETTGCTASVGIAGNMLMARIATRTAKPNGQYHITLERVEDHLRQLPINALPGVGHVLQEKLKKQTVQTCGQLMMISKVSLQKDYGMKTGEMLWNYSRGIDNRLVGDFQECKSIGADVNWGVRFKDMKDCENFLTNLCKEVSLRLQSSGMQGRTFSLKIKKRKKDADEPVKFMGCGDCENLSHSETIPVATDNVEVLQRIAKQLFGNFYIDVKQIRGIGLHVSRLESSETSKQGAEKYNLKSWLTSGPASMDKRKHPTGLDKKNADGPSVHEYGNLPGSSVPMENNIQDNQARADVSLTTPPLDILDMEVMRNLPPELFSEFNKVYGGKLADYITKGKGISENSSALRNSLLEKEAIKKKEELLDVEPILQKKPLSEIEAMQHEAEGGEVVPDSVSEPSFNVTHKSSFEKDDLLPASLSQLDGSVLQELPEDLKADIVLQLPAHRKQEICSNVAVVPPSENYQVSTGVNDSENLRSNHALNECLWAGNPPKWVEEFKISSCLVLKKLAEIYYKSGLTSTLSSVLHQIISEFHQLNLVHHISDDSVNITCELLKQYIKVKIGKDIEEIYICFRLLKRFAAASQFFLQVYNNVFPYLQVYLINQTRHHENRVEIRRGVW 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04325 1161 MobiDBLite consensus disorder prediction 307 326 - -
Vivi2g04325 1161 PIRSF REV1 14 1157 IPR012112 GO:0003684|GO:0006281|GO:0016779|GO:0042276
Vivi2g04325 1161 Pfam impB/mucB/samB family C-terminal domain 656 777 IPR017961 GO:0003684|GO:0006281
Vivi2g04325 1161 ProSiteProfiles BRCT domain profile. 91 182 IPR001357 -
Vivi2g04325 1161 FunFam DNA repair protein REV1 435 489 - -
Vivi2g04325 1161 Gene3D - 435 489 - -
Vivi2g04325 1161 MobiDBLite consensus disorder prediction 32 66 - -
Vivi2g04325 1161 FunFam DNA repair protein REV1 477 578 - -
Vivi2g04325 1161 ProSiteProfiles UmuC domain profile. 418 599 IPR001126 GO:0006281
Vivi2g04325 1161 SUPERFAMILY BRCT domain 93 182 IPR036420 -
Vivi2g04325 1161 Gene3D BRCT domain 87 182 IPR036420 -
Vivi2g04325 1161 SUPERFAMILY DNA/RNA polymerases 412 649 IPR043502 -
Vivi2g04325 1161 FunFam DNA repair protein REV1 88 183 - -
Vivi2g04325 1161 Pfam impB/mucB/samB family 421 567 IPR001126 GO:0006281
Vivi2g04325 1161 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 654 767 IPR036775 GO:0003684|GO:0006281
Vivi2g04325 1161 CDD PolY_Rev1 369 769 - -
Vivi2g04325 1161 MobiDBLite consensus disorder prediction 1 66 - -
Vivi2g04325 1161 CDD BRCT_Rev1 95 182 - -
Vivi2g04325 1161 Gene3D - 367 398 - -
Vivi2g04325 1161 SMART BRCT_7 93 172 IPR001357 -
Vivi2g04325 1161 MobiDBLite consensus disorder prediction 798 812 - -
Vivi2g04325 1161 FunFam DNA repair protein REV1 655 776 - -
Vivi2g04325 1161 MobiDBLite consensus disorder prediction 790 813 - -
Vivi2g04325 1161 Gene3D - 590 644 - -
Vivi2g04325 1161 Gene3D - 418 579 IPR043128 -
Vivi2g04325 1161 Gene3D - 654 777 IPR036775 GO:0003684|GO:0006281
Vivi2g04325 1161 PANTHER DNA REPAIR PROTEIN REV1 1 1141 - -
Vivi2g04325 1161 MobiDBLite consensus disorder prediction 1 25 - -
Vivi2g04325 1161 Hamap DNA polymerase IV [dinB]. 415 784 IPR022880 GO:0003887
Vivi2g04325 1161 MobiDBLite consensus disorder prediction 249 274 - -
Vivi2g04325 1161 Pfam BRCT domain, a BRCA1 C-terminus domain 93 180 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04325 Vivi-Chr2 157201730 157217336 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04325 K03515 - gmx:100778409 1532.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04325 2 157201730 157217336 Vivi2g04325 2 157201730 157217336 ECH