Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04278 ATGGGTGAAGCAAGTGATGATTCCACTTCCACCAAATCCAATCCAAAACTAACCTTATTCCCTCTCATCGCTCTCATCTTCTACGAAGTCTCCGGCGGTCCTTTCGGAATCGAAGATTCCATCAAAGCCGGCGCCGGTCCTCTTCTCTCCCTCCTCGGTTTCTTACTTTTCCCTCTCATTTGGAGCATTCCCGAAGCTCTCGTCACCGCCGAACTCGCCACAACCTTCCCTCACAACGGCGGTTATGTACTTTGGATTTCATCAGCTTTTGGTCCCTTTTGGGGCTTCCAAGAAGGCTTCTGGAAATGGTTCAGTGGCGTCATGGATAACGCTCTTTACCCTGTTTTGTTCCTCGATTACTTGAAGCATTCTTTTCCGGTTTTTGACTTAATGGTAGCGAGAATTCCTGCTCTTTTGGGAATCACTTTTTTGCTTACTTATTTGAATTACAGAGGTCTTCACATTGTTGGTTTCACTGCTGTTTTGTTGGCTGTTTTTTCGCTTTCGCCGTTTGTTGTTATGGCGATTCTTTCTGTTCCGAAGATTAGGCCGAGGCGATGGCTTGTTGTCGATTTTAACAAAGTGAATTGGCGTGGTTACTTTAATAACATGTTCTGGAATTTGAATTATTGGGATAAGGCTAGTACTCTTGCAGGGGAGGTTGAAAATCCGAGTAAGACGTTTCCGAAAGCGCTTTTTGGAGGGTTGGTTTTGGTGATATGTTCGTATTTGATTCCGTTGCTTGCGGGGACTGGTGCTTTGAGTTCGTCTCCGAGTGAATGGGCTGATGGTTATTTTGCTGAAGTGGGTATGTTGATTGGTGGATTTTGGCTTAAACTGTGGATTCAAGCCGCGGCTGCCATGTCTAATCTCGGTTTGTTTGAAGCGGAGATGAGTAGTGATGCTTTTCAGCTTCTAGGGATGAGCAAATTGGGATTGCTTCCAGCAGTTTTTGCATCAAGGTCTAAGTATGGAACACCGACTGTTAGCATTTTGTTCTCTGCTAGTGGAGTTATCTTCTTGTCATGGATGAGCTTTCAGCAAATACTGGAGTTTCTCAATTTCTTATATGCTATAGGAATGCTTCTTGAGTTTGCAGCTTTTATAACATTGAGATTGAAGAAGCCAAATCTTTGCAGACCTTATAGAGTTCCGTTGCAAACATTTTGGGCAGCCATGCTTTGTTTGCCTCCTTCTTTGTTGCTTATACTTGTTATGTGTCTGGCGTCTTTGAGAACGTTCTTTGTGACTGGAGCAGTGGCAATGGTCGGATTTATATTGTACCCTATCTTGATTCAAGCCAAGGATAAAAATTGGTTACTTTTTGAAGCTGAACAACTTTCATCGCCTTCCAATGGTTGGCAGGAATGTATTCCAATTGTTTCAGAATTGGTTGATCAAGAAAGCAAGGATACTGAGCTTCTTTTGAGTTCACCATTGCCTATTGTGGAAGAAGAATTGTTGTTAATACCAAGTGATTCTAACCCAAGCTAG 1494 0.4304 MGEASDDSTSTKSNPKLTLFPLIALIFYEVSGGPFGIEDSIKAGAGPLLSLLGFLLFPLIWSIPEALVTAELATTFPHNGGYVLWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPVFDLMVARIPALLGITFLLTYLNYRGLHIVGFTAVLLAVFSLSPFVVMAILSVPKIRPRRWLVVDFNKVNWRGYFNNMFWNLNYWDKASTLAGEVENPSKTFPKALFGGLVLVICSYLIPLLAGTGALSSSPSEWADGYFAEVGMLIGGFWLKLWIQAAAAMSNLGLFEAEMSSDAFQLLGMSKLGLLPAVFASRSKYGTPTVSILFSASGVIFLSWMSFQQILEFLNFLYAIGMLLEFAAFITLRLKKPNLCRPYRVPLQTFWAAMLCLPPSLLLILVMCLASLRTFFVTGAVAMVGFILYPILIQAKDKNWLLFEAEQLSSPSNGWQECIPIVSELVDQESKDTELLLSSPLPIVEEELLLIPSDSNPS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04278 497 Gene3D Amino acid/polyamine transporter I 14 446 - -
Vivi2g04278 497 PANTHER POLYAMINE TRANSPORTER PUT1 8 449 IPR044566 GO:0022857
Vivi2g04278 497 FunFam Amino acid permease, putative 13 443 - -
Vivi2g04278 497 PIRSF AA_transporter 1 452 - -
Vivi2g04278 497 Pfam Amino acid permease 23 396 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04278 Vivi-Chr2 156516516 156520080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04278 1 471 Organic Solute Cotransporters AT3G19553 74.268 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04278 - - vun:114172952 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04278 2 156516516 156520080 Vivi2g04278 2 156516516 156520080 ECH