Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g04068 ATGTTTTCAGCTACCTACCCTTCAATATTCACTCTTCTCTTCTCATATAAAACCATCTCACCCCATGCATCTTTCAACCACAACTCTCTTTCAACCCTTTCCTTTTCTACTGTTACTTCTGTAAACCGACTGAGTTCTTCTGCTACCAAAAACATCAAGATGGTTAGTGTGTCTGAAATTCGCAAGGCACAGAGGGCAGAAGGACCTGCAACTATCTTGGCGATTGGCACTGCTAATCCGGCTAACTGTGTTGAACAAAGCACATATCCTGATTTTTACTTTAAGATCACTAACAGTGAGCACAAAACTGTTCTCAAAGAGAAATTCCAACGCATGTGTGATAAATCTATGATTAAGAGAAGATACATGTATCTAACTGAAGAGATTTTGAAAGAAAATCCTAGTCTTTGTGAATATATGGCACCTTCATTGGATGCTAGGCAAGACATGGTGGTGGTAGAGGTCCCTAGACTTGGGAAGGAGGCTGCTGTGAAGGCTATAAAAGAATGGGGTCAACCAAAATCCAAGATTACTCACTTAATCTTTTGCACCACAAGTGGAGTGGACATGCCTGGTGCTGATTACCAACTTACCAAACTCTTAGGTCTTCGTCCATATGTGAAGAGGTACATGATGTACCAACAAGGGTGCTTTGCTGGTGGCACGGTGCTCCGTTTGGCTAAGGACTTGGCTGAGAACAACAAAGGCGCTAGAGTGTTGGTTGTTTGTTCAGAAGTCACTGCAGTTACATTCCGTGGTCCTAGTGATACTCACTTGGACAGTCTAGTTGGACAAGCTTTATTCGGAGATGGAGCTGCTGCACTCATTGTTGGTTCTGACCCTGTACCAGAAATCGAGAAGCCTATCTTTGAGATGGTTTGGACTGCACAAACAATTGCTCCAGACAGTGAAGGTGCGATCGATGGTCATCTTCGTGAAGCTGGACTAACATTTCATCTTCTTAAAGATGTTCCCGGGATTGTTTCAAAGAACATCAACAAAGCACTGGTTGAGGCATTCCAACCTTTAAACATTGATGATTATAACTCAATCTTTTGGATTGCTCATCCTGGTGGACCTGCAATTCTAGACCAAGTTGAGCAAAAGTTAGGGTTAAAACCTGAAAAGATGAGGGCCACAAGAGAAATACTAAGTGAATATGGTAACATGTCAAGTGCATGTGTGTTGTTCATCTTAGATGAGATGCGTAAGAAATCAGCTAAAGATGGACTTAAGACTACTGGAGAAGGGCTTGACTGGGGTGTGTTGTTTGGATTCGGACCTGGACTTACCATTGAAACTGTTGTTCTCCATAGCGTGGCTATTTGA 1329 0.4251 MFSATYPSIFTLLFSYKTISPHASFNHNSLSTLSFSTVTSVNRLSSSATKNIKMVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFQPLNIDDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMRATREILSEYGNMSSACVLFILDEMRKKSAKDGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g04068 442 Pfam Chalcone and stilbene synthases, C-terminal domain 291 440 IPR012328 -
Vivi2g04068 442 Gene3D - 289 442 IPR016039 GO:0016746
Vivi2g04068 442 ProSitePatterns Chalcone and stilbene synthases active site. 209 225 IPR018088 GO:0009058|GO:0016746
Vivi2g04068 442 PIRSF PKS_III 55 442 IPR011141 GO:0009058|GO:0016747
Vivi2g04068 442 FunFam Chalcone synthase 1 289 441 - -
Vivi2g04068 442 Gene3D - 45 288 IPR016039 GO:0016746
Vivi2g04068 442 Pfam Chalcone and stilbene synthases, N-terminal domain 58 281 IPR001099 -
Vivi2g04068 442 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 57 440 IPR011141 GO:0009058|GO:0016747
Vivi2g04068 442 SUPERFAMILY Thiolase-like 54 286 IPR016039 GO:0016746
Vivi2g04068 442 CDD CHS_like 69 437 - -
Vivi2g04068 442 FunFam Chalcone synthase 2 53 288 - -
Vivi2g04068 442 SUPERFAMILY Thiolase-like 288 439 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g04068 Vivi-Chr2 153628328 153634550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g04068 191 427 Miscellaneous Gene Families AT4G34520 25.182 8.48e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g04068 K00660 - gmx:100170701 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g04068 2 153628328 153634550 Vivi2g04068 2 153628328 153634550 ECH