Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03972 ATGAAGAATCAACCTCAACATAGATCAAATATCAAATGCAAATACAAATTTCAAGGAGATTATGTTAGCAAAATTTTTGGCCTCTCTTTCTCCTTCCTATTTTCCATTTGGTGCCTCATTTCCATCTTCCATTCTAGGCTTCACCTTGCTCACGGTTCTTCTAAAGGAGGAGCTATGTTAGAGTTGAATGAATCAACCAGCATTAGTCAGAAACTAGTAAAACCGATGTACTCGGTTGCGGAAACAATTAGTTTAGAACAAGTATTTTGGCGAGTTTTAGGTAATAATAGTAGATTAGTGTGCAAGTTACAATCTAAACAAGAGGAAAAGAAGCTTCAATCATCGCATGCTTCTCTCGACGATGAGTTTCATAACATATCAGTATTAGGAAAGCAAGAAAAGAGCAACGATTCGCTTGTTAACATAACACACCGTCTTGAATCGGATGGTTCCGTGTACAATTACGCATCTGAGTCGAAAGGTGCAAAGGTAGTGGCACATAATAAGGAGGCTAAAGGTGCTATAAATATATTAGGAAAGGATCATGATAAGTATTTGAGAAACCCTTGTTCTGTTGCTGGAAAGTTTGTTGTTATCGAACTTTCGGAAGAGACTTTGGTTGATTCTGTCAAAATCGCGAACTTTGAGCATTATTCTTCTAATTTCAAGGAATTTGAATTGGCTGGTAGTTTGATTTATCCAACCGAAACGTGGAGCGAGCTAGGGAGCTTTGTTGCTACAAATGTTAAGCAGGCACAGGTTTTTAAACTGCCTAAGCCTAATTGGGTGAGGTATTTGAAGCTGAGCTTGCTTAGTCATTACGGATCGGAGTTTTATTGCACGCTTAGTGTTCTAGAAATTTACGGGATCAACGCTATAGAGAGAATGCTTAAGGATCTAATAGTTACTTCTGTGGAATCCATTCCTCACAAGTTACCAACTCAGAATATCAGTGACATTATAACGCAGTCGTTGAAATCAGAAGCTGATCAAATTGACAGAAAAGGTATTGAAGTTGAAATTAAGAATGATACTGTGGCTGCTGAAATATCCAGCGCTAACGATGACACGCAAAAAATTGAGGCGGAAGTGACGACGAATCCAGTGATCGTGAACTTGGTTCCTGATCCTGTGATGGAACTCAGACAGCAATTAAATGGTAGGATAACTGGTGACACTGTTCTGAAGATTTTGATGCAGAAAGTGAAGTCTGTGGAGGTAAACTTATCGGCATTAGAGGATTACATCAAAGAATTGAATAGGAGACAAGGGATTACGATACCAAATCTGGAGAAACAGATGTTTAGATTATCAGAAAGCTTGGAACAAAGCAAGACAGAAATCAATGATCACCAGCAGTGGAACACAGATATGGAAAAAGGAATATCAGAAGTTAAGTCATGGAAAGATGATGTATCATCTCAGCTTAACGATTTAGCTAGAGAAAATAGCATGTTAAGATTAGATGTTCAACGGGTTGCAAGGGATCAAGAAAATCTCGAAGCCAAAGAGCTTGTCGTGTTAGCAACGAGTTTTGCTTTCGTGTGCCTTGCAGTTCTGAAGATACTTTTAGCACGCGTGTTCTCGTTTTCTACAATCAATGATGATAATGTGCACCAGACAACCAGAGGATGGTTTACACTGCTTCTATATTGCAGTCTAACAATATTCATTATTTTGTTCTATAGCTAG 1692 0.3848 MKNQPQHRSNIKCKYKFQGDYVSKIFGLSFSFLFSIWCLISIFHSRLHLAHGSSKGGAMLELNESTSISQKLVKPMYSVAETISLEQVFWRVLGNNSRLVCKLQSKQEEKKLQSSHASLDDEFHNISVLGKQEKSNDSLVNITHRLESDGSVYNYASESKGAKVVAHNKEAKGAINILGKDHDKYLRNPCSVAGKFVVIELSEETLVDSVKIANFEHYSSNFKEFELAGSLIYPTETWSELGSFVATNVKQAQVFKLPKPNWVRYLKLSLLSHYGSEFYCTLSVLEIYGINAIERMLKDLIVTSVESIPHKLPTQNISDIITQSLKSEADQIDRKGIEVEIKNDTVAAEISSANDDTQKIEAEVTTNPVIVNLVPDPVMELRQQLNGRITGDTVLKILMQKVKSVEVNLSALEDYIKELNRRQGITIPNLEKQMFRLSESLEQSKTEINDHQQWNTDMEKGISEVKSWKDDVSSQLNDLARENSMLRLDVQRVARDQENLEAKELVVLATSFAFVCLAVLKILLARVFSFSTINDDNVHQTTRGWFTLLLYCSLTIFIILFYS 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03972 563 ProSiteProfiles SUN domain profile. 132 292 IPR012919 -
Vivi2g03972 563 PANTHER MEMBRANE PROTEIN CH1 RELATED 121 524 IPR045120 GO:0016020
Vivi2g03972 563 Pfam Sad1 / UNC-like C-terminal 167 289 IPR012919 -
Vivi2g03972 563 Coils Coil 402 422 - -
Vivi2g03972 563 Gene3D - 170 300 - -
Vivi2g03972 563 SUPERFAMILY Galactose-binding domain-like 191 287 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03972 Vivi-Chr2 152384952 152387167 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03972 - - gmx:102668828 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03972 2 152384952 152387167 Vivi2g03972 2 152384952 152387167 ECH