Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03968 ATGACTAAACCCGAACGACCACCGTCAAGCCGCACCAACCTCGCCTCATGCGTCGTCGCCACCATTTTCCTAATCTTCATCTTCATCATCGTCTTCACTCTCTACTTCACACTTTTCAAACCCCAAGATCCTAAAATCTCCGTCACCGCCGTCCAACTCCCCTCCTTCTCCCTCACAAACAACGCGACCACCGTTAACCTAACCTTTTCCCAATACGCATCCGTTAGAAACCCTAACAGAGGAACATTCTCACACTACGACAGCTCCTTTCAGCTTCTCTGCTATGGAAGACAAATCGGTTTCATGTTTGTCCCCGCCGGGAAGATCTATGCGAGGAGAACGGAGTACATGGCCGCCACGTTTACTGTTCAGTCTCTTCCGGTGGGGTTGGAGGGGAATGGTACTGATGGAGTTAGTAGAGGTGGGCCGACGATGGAGATTGAGTCGACGATAGAGATGGCGGGGAGAGTGAGAGTGTTGAATCTGTTCAGTCATCATGTGGAGGCGAAAGCTGAATGCAGAGTCGCCATCGCCGTCGCTGATGGAACCGTCATAGGTTTTCACTGCTAA 570 0.5123 MTKPERPPSSRTNLASCVVATIFLIFIFIIVFTLYFTLFKPQDPKISVTAVQLPSFSLTNNATTVNLTFSQYASVRNPNRGTFSHYDSSFQLLCYGRQIGFMFVPAGKIYARRTEYMAATFTVQSLPVGLEGNGTDGVSRGGPTMEIESTIEMAGRVRVLNLFSHHVEAKAECRVAIAVADGTVIGFHC 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03968 189 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 180 - -
Vivi2g03968 189 Pfam Late embryogenesis abundant protein 74 173 IPR004864 -
Vivi2g03968 189 SUPERFAMILY LEA14-like 24 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03968 Vivi-Chr2 152369714 152370471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03968 - - psat:127120822 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03968 2 152369714 152370471 Vivi2g03968 2 152369714 152370471 ECH
Vivi2g03968 2 152369714 152370471 Vivi5g06067 5 165744415 165745429 PCT