Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03928 ATGCAATCACATTATTCACTCCATTCCTTTCCGAAACCATTCCCTATCGCATCATCCTCTTCTTTTATCTTTCGTTCTAACACCATCTTCACTCTCCAATCCTCATCTTTCTCCACCTCACTTCTCTCTTCTCCTCCTCTTCGCTGCAATCTCAATCTACCACCGCGCATTCTAAGGGACACCAAGGGATTCGCGAGTTCTTCCGATGATTCTAGTGCCGAAAACTCCGATTCTGGATGTCAATTGGCAACACCGATTGTTTCTTCCGATCGTGATAATGGATCTGTTGGACTTGTGAAGTTTATGCTGTTCTTTGCGTTCCTCACAGTTCGAGATTCTTATCCCGCTGCTGCTGCTTCTGAGTTTGCTACTGGTTTGATTTCAATTCCTATATTTGGAGATGTCGGTGACTTAAGCACAGGTTTTGCTTCAGCTTTTTTGCTGATATTTTTCTCTGAACTGGGAGACAAGACCTTTTTCATTGCAGCACTGTTAGCAGCTAGGAATTCAGCTGGTGTTGTTTTCGTCGGGACATTCGGTGCACTTGCGGCAATGACTGTCATATCTGTCGCTCTTGGACGAACATTTCATTATGTTGATGAAATCCTTCCGTTCAGGTTTGGACAAACTGATTTACCTATTGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTTGGGGTCTCTACCTTGCTGGATGCCTCGTCTAGTGATGGCCAAAAATCAGACGACGAACAGAAGGAGGCAGAGTTGGCAGTTTCTGAATTTTCTGGAAATGGTGCTGGGATAGTAGCTGCTGCTAGCACAATTGCCAGCACTTTTCTCTTAGTATTTGTTGCTGAGTGGGGTGATAAATCATTTTTCTCTACAATTGCCCTAGCAGCAGCTTCTTCACCCCTGGGAGTCATAGCTGGATCACTGGCCGGTCATGGTGTTGCAACTTTGATAGCCGTACTTGGTGGCACTTTATTGGGGACATTTTTGTCGGAGAAGGTTATTGCCTACGTTGGAGGTGTTCTCTTTCTCGTTTTTGCTGCAGTAACGGTGTTTGAAATTGTCCAGTAG 1065 0.4469 MQSHYSLHSFPKPFPIASSSSFIFRSNTIFTLQSSSFSTSLLSSPPLRCNLNLPPRILRDTKGFASSSDDSSAENSDSGCQLATPIVSSDRDNGSVGLVKFMLFFAFLTVRDSYPAAAASEFATGLISIPIFGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFVGTFGALAAMTVISVALGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDDEQKEAELAVSEFSGNGAGIVAAASTIASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLIAVLGGTLLGTFLSEKVIAYVGGVLFLVFAAVTVFEIVQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03928 354 ProSitePatterns Uncharacterized protein family UPF0016 signature. 153 162 IPR001727 -
Vivi2g03928 354 Pfam Uncharacterized protein family UPF0016 272 345 IPR001727 -
Vivi2g03928 354 Pfam Uncharacterized protein family UPF0016 144 227 IPR001727 -
Vivi2g03928 354 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 138 350 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03928 Vivi-Chr2 151546537 151551757 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03928 - - gmx:100809618 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03928 2 151546537 151551757 Vivi2g03928 2 151546537 151551757 ECH