LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g03918	ATGGAATCCAACACGTCGTCAGCGATGCCACCGGAATTGGCTGCAACGAATGGAACCCCAAATCCAGTGTCGCCATCGCTAGTCAATTTGTATAGGATAACCAAAGTTCTGGAGCGTTTGGCTTTTCACTTTCAACCTGGCAACCGATTCGATTCTTTCGAGTTTTTTAACCTATGCCTCTCCCTCTCTAGAGGGATTGATTATGCACTTGCCAATGGTGAACCTCCGCCAAAAGCTAACGAACTGCCTACCTTGATGAAACAGATGTATCAAAGAAAGACGGATGAACTATCTCTAGCAGCTGTGATGGTTTTGATGATATCTGTGAAGAATGCCTGTAAAATTGGATGGTTCCAGAAGAAAGAGTCAGAAGAACTTTTAACAATTGCTGACGAGATAGGAAAGATCTACTGCACCCTGGGAAATATTAGTAACGGGCCTAGTTCTAGCCATTCTGCAGTGTTAGCTATAATGGAAAGGTTCTATCCAAGAATGAAACTGGGTCCAATAATTGTGTCAATCGAAGCTCAGCCTGGATATGGAGCTTCTGCTGTTGACTTCCATATCACAAAGAACAATGTTCAATCAGATAAAAAAATTTGGTTATTGGTGGCACAAACTGATAACATTGAGACATCTGCATGCCTCATCAGCCCTCAGCAAGTGAATTTTCTCCTGAATGGAAAAGGAATTGACACAAGGACTAACTTTCGAATGGATCCTGGGCCACAGATGCCTACTAATGTGACTAGTGTGCTTAAATTTGGGACAAATCTGCTTCAAGCTGTGGGTCAGTTCAACGGTAATTATATTATACTTGTTGCCTATATGAGTGTTGTGCCCTTGCCCGAGCATCCAGTTCTTCCACCAGATTATGTTAAGCCTGCTGTTACTTCTGTAGATTCAGATTCAGATATTATCGAGGGGGCATCACGATTCTCACTTAATTGTCCGATAAGCTTTAAACGTATCAAGACTCCTGTTAAAGGTCGGTCATGCAAACATTTCCAGTGCTTTGACTTTGACAACTTCATTAAAATAAATTCTAAGAGACCATCCTGGCGCTGCCCCCATTGCAATCAGAATGTCAGCTATACAGAAATTCGTCTAGACAGAAACATGATTGAGATCCTGGAAAAAGTTGGCGAGAATATTGTGGAAGTGACTGTCCATGCTGATGGATCGTGGCAGCCAGTCTTGGAAAATGATCATGATGTGGGTAGGATACAGAATAAGGTCCACAATTGTGATAAGGAACCAACTGAACAGCTAGAATCTGCTAGCTCCCCTGATACATTTCCCGATGTCGTGGACCTCACCGACAATGATATGGACATAATAATGGATATTTGTGAAACTGCAGATAGAAAGCCTTCACAGGGTTCTGCTCCGACCAGTGCTCAAATCGAAGACAATTTTTGGGCTGGACTTTATATTGCCAACACTAGGTCTGATACTCCTACAGTTGGTGTCACCGACCTTCCTGTTCTTGCAGATGCTGTTTCTCCTGCATTAATTCAAGAATCTGAGGGTCATGACAATACTTCTGCCAATCATAACCAGTTCCTGGCACTGAGTAATTTGGAGATGATGAATAATTATATGAGTTCATTTGTTAGCGAGTATGGGAGGTCATCCTCGTCACCGAGACATATTCATAGGACTCCAGTAGCTGTTCAGGCCCTTCCAGTCCAATCTCAGCCATTAGGGCCACAGCAAAATTCAGTAACCAATTTGGATTCCTTGATAACCAGCAGTCCCTCTGCTACTCATGCTTCTTTGTCCAACCCTACCTCCGCTGATCCTTATAATGCCATACTGAGTGATGCAGAAAGACAGCAACTTTTTTCTAGATCCCCGCTGAACATGCCTCAGGTCTCGGCAGCAACACAGAACCGAATGCCAACCGTTAATATGCCAGCCCCAACTCATAATCGAGTGCCACCAGTTACTATGTCAGCCACAACTCTTAACCGAGCACCAAGTCATTTGCAAAACCAACAATACAGAGCAGGTATGCTGAATGATTTTAGAAATTCCCACCTGCAGCAAACTCTTAATCCCCGGGCGCATACCCCAATGCAACAATTAAACGCCCAACGATCTCACATTCAGCAAGGGGTTTCACAAGCTAATGCAGCTGGAGGTGCAGCAAATAGCCAACAAGCCAGGGTTATGGCTTCATCACATGTTGCCAGACAAGGAGAGCAAAGAGGACCACCGGTACAGGCAGTTTCTAGGACTGACGAATTGTTCAATTCACAACCAGATCAGAACTGGCGTCCTACTTCGCGAATGCGCGGAAGTCTTTCAGGTCAGCAGCTTACTGATGACGTTAGGCAGCGCTTAATTATGCCATCATCACAAGAAGCTCAAGCTCAAAATTCAAGACCACAGGGTCCACCACAACCAGGCCGAACAACGTCTCAACTTAATGTGCTCATTGCAAACAGTAGAAATGCTCATAATCCTCCGAGACCGTAA	2484	0.442	MESNTSSAMPPELAATNGTPNPVSPSLVNLYRITKVLERLAFHFQPGNRFDSFEFFNLCLSLSRGIDYALANGEPPPKANELPTLMKQMYQRKTDELSLAAVMVLMISVKNACKIGWFQKKESEELLTIADEIGKIYCTLGNISNGPSSSHSAVLAIMERFYPRMKLGPIIVSIEAQPGYGASAVDFHITKNNVQSDKKIWLLVAQTDNIETSACLISPQQVNFLLNGKGIDTRTNFRMDPGPQMPTNVTSVLKFGTNLLQAVGQFNGNYIILVAYMSVVPLPEHPVLPPDYVKPAVTSVDSDSDIIEGASRFSLNCPISFKRIKTPVKGRSCKHFQCFDFDNFIKINSKRPSWRCPHCNQNVSYTEIRLDRNMIEILEKVGENIVEVTVHADGSWQPVLENDHDVGRIQNKVHNCDKEPTEQLESASSPDTFPDVVDLTDNDMDIIMDICETADRKPSQGSAPTSAQIEDNFWAGLYIANTRSDTPTVGVTDLPVLADAVSPALIQESEGHDNTSANHNQFLALSNLEMMNNYMSSFVSEYGRSSSSPRHIHRTPVAVQALPVQSQPLGPQQNSVTNLDSLITSSPSATHASLSNPTSADPYNAILSDAERQQLFSRSPLNMPQVSAATQNRMPTVNMPAPTHNRVPPVTMSATTLNRAPSHLQNQQYRAGMLNDFRNSHLQQTLNPRAHTPMQQLNAQRSHIQQGVSQANAAGGAANSQQARVMASSHVARQGEQRGPPVQAVSRTDELFNSQPDQNWRPTSRMRGSLSGQQLTDDVRQRLIMPSSQEAQAQNSRPQGPPQPGRTTSQLNVLIANSRNAHNPPRP	827

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g03918	827	PANTHER	ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN	32	515	-	-
	Vivi2g03918	827	MobiDBLite	consensus disorder prediction	714	774	-	-
	Vivi2g03918	827	MobiDBLite	consensus disorder prediction	1	20	-	-
	Vivi2g03918	827	SUPERFAMILY	RING/U-box	313	391	-	-
	Vivi2g03918	827	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	291	399	IPR013083	-
	Vivi2g03918	827	CDD	SP-RING_PIAS-like	314	361	-	-
	Vivi2g03918	827	MobiDBLite	consensus disorder prediction	786	819	-	-
	Vivi2g03918	827	MobiDBLite	consensus disorder prediction	747	774	-	-
	Vivi2g03918	827	MobiDBLite	consensus disorder prediction	714	728	-	-
	Vivi2g03918	827	Pfam	MIZ/SP-RING zinc finger	314	361	IPR004181	GO:0008270
	Vivi2g03918	827	ProSiteProfiles	Zinc finger SP-RING-type profile.	302	383	IPR004181	GO:0008270
	Vivi2g03918	827	MobiDBLite	consensus disorder prediction	786	827	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g03918	K04706		-	gmx:100780539	904.049

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi2g03918	2	151331467	151342327	Vivi2g03918	2	151331467	151342327	ECH