Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03916 ATGGAAGATCTCCGAACTCCGACGCTAAAGTTTTTCACCGATCAAGAGCTTTGTTATGCTGATATCGTTCCTCCGGCTCAGGTTCGAGCAAGAATTGAAGTGTCAGTGCTCAGTTTCCTCAAAATATTGAATGCATCTAACCCTGCCATCTCTGATTTGCCTCTGATTCAAAGAAAATTGAGCAACAGTCGGGTGAATCATGGTCTGTTAACCGAATTATCATATGTTTTTCTCTCCAATTCTGTGTCTATAAGGTCTCTTATGAGACCTAATGCAGGAAAAGCCTTTGTTAGGGTGTGGAAGGTGATGGAAATGTGCTATCAGATATTGCTTCAGGAAAAGCGTGTCACACAGAGAGAACTCTTCTACAAACTGCTGTGTGATTCGCCACATCTGTTTCCTTCTCAAAAGGACGTCAATAGGACAATCCAAGATCTTGTAGCGTTGCTTCGGTGCAGCAGATACAGTCTTGGAATCATGGCATCCAGTCGCGGACTCATTGCTGGCCGTCTGATTATGCAGGAACCAGGCAAAGAGCCTGTTGATTGCTCAGTGTGTGGATCTTCTGGACATACAATTTCTGGTGACTTGAGTTTGTTAGATAAATTGATTCTAAATGCAGATGCACGGTACATTATTGTTGTGGAAAAGCATGCAATATTTCAACGGCTTGCTGAAGATAGGTTTTTTAATCAAATTCCAAGCATTCTTATCACGGCTAAAGGCTACCCTGATATGGCCACAAGATTTCTTCTTCATCGAATCAGTAGAGCATTTCCAGACTTGCCAATTTTAGCTTTGGTGGATTGGAACCCAGCTGGATTAGCTATACTATGCACCTTCAAATTTGGAAGTGTAGGAATGGGCCTAGAGTCATATAGATACGCTTGCAATGTCAAGTGGTTAGGACTGCGGGGGCATGATCTACCCATGCTGCCTGATCAATCTTTTGTTCCATTGAAGACAAAGGACCTACAAATTGCTCAAAGCTTAATGTCCTCCAAAACCTTACAGGAGAATTACAAGGAAGAGGTCGCCTTGATGGTTCAGAGCGGCAGGAGAGCTGAAATAGAAGCCCTTTACTATCATGGATATGATTATTTGGGGAAGTACATAGCTAAGAAAATTGTACAGTCTGATTATATATAA 1149 0.4212 MEDLRTPTLKFFTDQELCYADIVPPAQVRARIEVSVLSFLKILNASNPAISDLPLIQRKLSNSRVNHGLLTELSYVFLSNSVSIRSLMRPNAGKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCDSPHLFPSQKDVNRTIQDLVALLRCSRYSLGIMASSRGLIAGRLIMQEPGKEPVDCSVCGSSGHTISGDLSLLDKLILNADARYIIVVEKHAIFQRLAEDRFFNQIPSILITAKGYPDMATRFLLHRISRAFPDLPILALVDWNPAGLAILCTFKFGSVGMGLESYRYACNVKWLGLRGHDLPMLPDQSFVPLKTKDLQIAQSLMSSKTLQENYKEEVALMVQSGRRAEIEALYYHGYDYLGKYIAKKIVQSDYI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03916 382 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 26 382 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vivi2g03916 382 CDD TOPRIM_TopoIIB_SPO 210 367 IPR034136 -
Vivi2g03916 382 FunFam Meiotic recombination protein SPO11-2 18 162 - -
Vivi2g03916 382 SUPERFAMILY DNA topoisomerase IV, alpha subunit 95 382 IPR036078 GO:0003677|GO:0005694
Vivi2g03916 382 Pfam Type IIB DNA topoisomerase 94 159 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Vivi2g03916 382 Gene3D - 22 162 IPR036388 -
Vivi2g03916 382 Gene3D - 163 382 - -
Vivi2g03916 382 PRINTS DNA topoisomerase VI subunit A family signature 154 169 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vivi2g03916 382 PRINTS DNA topoisomerase VI subunit A family signature 212 229 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vivi2g03916 382 PRINTS DNA topoisomerase VI subunit A family signature 269 285 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vivi2g03916 382 PRINTS DNA topoisomerase VI subunit A family signature 136 153 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vivi2g03916 382 PRINTS DNA topoisomerase VI subunit A family signature 236 257 IPR002815 GO:0003677|GO:0003918|GO:0005694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03916 K10878 - gmx:100784732 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03916 2 151290978 151295094 Vivi2g03916 2 151290978 151295094 ECH