Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03865 ATGAAACAGGTGAAGCCATTGCAGTTGTTTCATAATTTGGTGAAAACAACACAGAATGAACGTGGAAGGTTGATGGGTTTAGATGTTGGTGATAAATATGTCGGTCTCGCTCTTTCCGACTTTGATAACAAAATTGCTTCACCTTTCAGTGTTCTCGTCCGCAAGAAATCAAACGTTAAATTAATGGCTTCTGATTTTAACTGTCTGATTTCTAAGTATTCCTTGAAAGGCTTTGTTATTGGCCTCCCTTTTGATAGACATCTGGTGTCTTCTGATGCTGTGCAAATGAAGGTCTTCATTGATAACCTTCGTAGAACAAACATGCTCCAAGATGTAGACTATACCTTTTGGAATGAGTGCTTCACGTCAAAGAATGTAGAATTATTGTTAAAGCCTTTGAACTTGAAACATCCAGTTCATTCCAAAACTATGCTAGACAAGTTTGCTGCTGTAGGAATACTTCAAGGGTACCTGGACTATGTCAACAGAAAAGCAAAGCTAATAACACCAGAGTAA 516 0.3798 MKQVKPLQLFHNLVKTTQNERGRLMGLDVGDKYVGLALSDFDNKIASPFSVLVRKKSNVKLMASDFNCLISKYSLKGFVIGLPFDRHLVSSDAVQMKVFIDNLRRTNMLQDVDYTFWNECFTSKNVELLLKPLNLKHPVHSKTMLDKFAAVGILQGYLDYVNRKAKLITPE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03865 171 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 170 IPR005227 GO:0006364
Vivi2g03865 171 Pfam Holliday junction resolvase 23 159 IPR005227 GO:0006364
Vivi2g03865 171 FunFam Putative pre-16S rRNA nuclease 21 169 - -
Vivi2g03865 171 Gene3D - 21 167 IPR037027 GO:0006139
Vivi2g03865 171 CDD YqgF 24 160 IPR005227 GO:0006364
Vivi2g03865 171 SMART rnase_8s 22 126 IPR006641 GO:0006139
Vivi2g03865 171 SUPERFAMILY Ribonuclease H-like 22 162 IPR012337 -
Vivi2g03865 171 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 162 IPR005227 GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03865 Vivi-Chr2 150587011 150589609 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03865 - - lja:Lj0g3v0306549.1 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03865 2 150587011 150589609 Vivi2g03865 2 150587011 150589609 ECH