Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03804 ATGGTGGCAACACCCCCATTGGATATGAAGCGGGCAGAGTCTTCCCAGCAGCACGTGAGAGCTTTAAATGCCCAGTTTGCGAGCTGGGTTCAAACACAGTTAAAGAATCACCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGATCATGCTACAGGCATTATGGAAAAATTTAGTGATGTTGTCAACTGGCTTAAAACAAATGCCACCCACAACAACCAACAACAACAACAACAACAACCAAGCCTTATCCCACCAAGTGGGTTTGGCCTCAAAGCAAATACCACCCACAACAACCAACAACAACAACCAAGCCTTATCCCACCAAGTGGGTTTGGCTTTGGCCTCAAAGCAAATGCAACCAAGGCAGATAATTCTACTTCCGGTGCTGGTTCCGGTGCTTCTTTAGCTGGGAAAAAGTTTTTGCCTGAAGTAACAAACAAAGAAAATAAGACTTTTGGAGAAAAAATTGAATCTCCTCCTGTCAATACTACTACTACTACAAGTTTTGGTAGTTCATGGAGCCCTGGGATATTTTCAAACAATCAAAACATTTTTGCATTCGGAAATCAAAGTTCCGCCCCTTCCAACTCCAATCATAACGCTTCAGATGATGCTGATGCTGAAAATGATGAAGAGCAGCCCAGTAGCCCATCAGTGAAGAAGTCAGAAGAGAAAGGTGTTGCAGTTGTACATGAAGTGAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCAACTGATAAAGATGTATGGAAAGATAAAGGAATGGGCCATCTGTCCATTAAATGCAAAGAAGGGGTCGCTAAGGCTACAAAAGAGTCCAGACCTACAATCATTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCTGGAATCAAGACAAGTGCACAAAAGAACTCTCTTGTTGCGATATTTCATACTTCGGGTAATGATGATGGTGGAGATAATGGTAGTGTTGTTGCACGAACATTTTTGATCCGGATGAAAACAGAAGATGATCGAAATAAATTGGCTTCAATTATTCAAGAATATGCTCCAGTATCTTGA 1068 0.4157 MVATPPLDMKRAESSQQHVRALNAQFASWVQTQLKNHPDELWEDGVRDYLDHATGIMEKFSDVVNWLKTNATHNNQQQQQQQPSLIPPSGFGLKANTTHNNQQQQPSLIPPSGFGFGLKANATKADNSTSGAGSGASLAGKKFLPEVTNKENKTFGEKIESPPVNTTTTTSFGSSWSPGIFSNNQNIFAFGNQSSAPSNSNHNASDDADAENDEEQPSSPSVKKSEEKGVAVVHEVKCKLYVKSSDPTDKDVWKDKGMGHLSIKCKEGVAKATKESRPTIIVRNEVGKILLNALLYPGIKTSAQKNSLVAIFHTSGNDDGGDNGSVVARTFLIRMKTEDDRNKLASIIQEYAPVS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03804 355 MobiDBLite consensus disorder prediction 73 110 - -
Vivi2g03804 355 MobiDBLite consensus disorder prediction 152 171 - -
Vivi2g03804 355 SUPERFAMILY PH domain-like 224 352 - -
Vivi2g03804 355 CDD RanBD_NUP50 226 352 - -
Vivi2g03804 355 Pfam RanBP1 domain 222 350 IPR000156 GO:0046907
Vivi2g03804 355 MobiDBLite consensus disorder prediction 189 228 - -
Vivi2g03804 355 FunFam AT4g11790/T5C23_220 119 354 - -
Vivi2g03804 355 Gene3D - 146 354 IPR011993 -
Vivi2g03804 355 MobiDBLite consensus disorder prediction 189 205 - -
Vivi2g03804 355 ProSiteProfiles Ran binding domain type 1 profile. 224 350 IPR000156 GO:0046907
Vivi2g03804 355 PANTHER RAN BINDING PROTEIN 40 352 IPR045255 -
Vivi2g03804 355 SMART ranbd_3 214 351 IPR000156 GO:0046907
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03804 Vivi-Chr2 149472568 149479287 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03804 K14295 - gmx:100816975 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03804 2 149472568 149479287 Vivi2g03804 2 149472568 149479287 ECH