Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03769 ATGGCTGCTCCGCACTTCCATTGCACCTCAACCTTGGTATCACGTTCAAACCCTTCCTTCCGTTTGCTTCACAATTTGAAGCTAACAAACCCCAACAATTCATGGCTAGGAACCAAAATTAGGGTTCAACCGTGCATTCTCAGTGCAAAACCTCCCGTGTCCATTTCCCACCGCCGCCCCGTCGCCGCCACCGTTTCCTTCAGCCTCCCCACCTCAAATCCAGAGCGTGTTTCTCCAGGCCAGGAAACTCCAAAATGGTCTTCCAAGGCTATAAAGTCGATTTCAATGGCTGAAGTGGAGGCGAGGAAACTCAGGTTTACTAATACCGGCACTGAAGCTCTTATTTTGGGGGTTCTTGTTGAGGGTACTAATCTGGCTAACAAGTTTTTGCGAGCCAACGGAATTACAATTTTCAAGGTGCGAGATGAAATTGTTAAAGTGGTTGGAAAAAATGAAATATTTTCAGTACCCCCCGTCCCCGAGCGTCCTCCAATGACTGAAGATGCTCAGAAGGCCCTTGATTGGGCTGTTGATAAAAAATTAAAATCAGATGATGGCGGGGAAGTAACCACAACACACATAATTCTTGGCATTTGGTCTGAAGTGGATTCCCCGGGTCACAAGATACTATCCAACCTTGGTTTTGATGACAAAAAAGCTAAAGAGCTAGAGTCCTCTATTTCTAAAGCTGTTGTTAATGATGAATAA 708 0.4548 MAAPHFHCTSTLVSRSNPSFRLLHNLKLTNPNNSWLGTKIRVQPCILSAKPPVSISHRRPVAATVSFSLPTSNPERVSPGQETPKWSSKAIKSISMAEVEARKLRFTNTGTEALILGVLVEGTNLANKFLRANGITIFKVRDEIVKVVGKNEIFSVPPVPERPPMTEDAQKALDWAVDKKLKSDDGGEVTTTHIILGIWSEVDSPGHKILSNLGFDDKKAKELESSISKAVVNDE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03769 235 Pfam Clp amino terminal domain, pathogenicity island component 97 149 IPR004176 -
Vivi2g03769 235 Pfam Clp amino terminal domain, pathogenicity island component 188 227 IPR004176 -
Vivi2g03769 235 Gene3D - 85 235 IPR036628 -
Vivi2g03769 235 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 12 233 IPR044217 -
Vivi2g03769 235 SUPERFAMILY Double Clp-N motif 85 222 IPR036628 -
Vivi2g03769 235 ProSiteProfiles Clp repeat (R) domain profile. 83 230 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03769 Vivi-Chr2 148869730 148875829 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03769 - - tpra:123908141 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03769 2 148869730 148875829 Vivi2g03769 2 148869730 148875829 ECH