Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03768 ATGGAGTGGCCTGCTTGTACGGATGAATATGAGAAGCTCTTATTAAGGATGAGCACACCAAGGGTTGTTATTGACAATGTCGTGTGTTCCACTGCTACTCTTGTCAAGGTTATTAGTGCAAGAAGACATGGTAGTTTACTTGATGCAATTCAAATTCTCATTGATCTAAACCTTGTAATTAAGAAAGCTTATATATCTTCTGATGGCAAATGGTTCATGGATGTTTTTCATGTTGTCGATCAAAATGGAAACAAGCTAATCGACGAGAGTGTTTTAAAGTATATAGAACAGTCGCTTGGGAGTGTTCACAGTGTGAGGACTAGTTGCTCGAACGGTCTCACTGCGCTTGAATTATCGGGAACCGATAGAGTTGGTCTTCTATCGGAGGTTTTCGCAGTACTTGCTGATCTTCAATGTGATGTTGTTGAAGCTAAGGTTTGGACTCACAATGGCCGCATTGCTTCTTTGATCTATGTTAAAGACTGCGATTCCGGAGCAACTATTGATGATTCTCAAAAGATTAAAAAGATTGAAGTTCGTTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAACTGCGAAAACTTCGGTCTCTATGTCTGTCATGCACAGTGAAAGAAGATTGCATCAAATGATGTTCGCTGATCGTGACTACGAGAGGACTCCCATTCTCAAGCTCATTTCCGATGACACTGTAGTGACGGTCCAGAATTGGGCGGAAAGGGGTTATTCAGTTGTGAATGTTCAGTGCAAGGATCGAATTAAACTATTATTTGATGTCGTATGCAATTTGACAGACATGGAATATGTTGTTTTTCATGCGACCATCAACACGAATAGTAACCAGGCTTACTTGGAGTTTTACATAAGACACAATGATGGCACGCCAATTAGTTCAGAACCAGAACGACAACGCGTAATTCAATGTTTAAAAGCTTCTGTGGAGAGAAGGGCATCTGAGGGTGTTCAACTAGAGTTATGCACAGAAGACAAAAAGGGACTTCTAGCAGAAGTGATGAGAACCTTCAGAGAAAATGGACTTAATGTTACAAGAGCTGAAATATCCACCACAGGAAAAATGGCTACAAATGTTTTCTATGTAACAGATGTGATTGGACACCAAGCTGATCCAAAAATCATAGAGTCTGTTAGGCAGAAAATTGGGTCAAGCAGTTTGGAAGTGAAGGAATTACCATTGGTATATCATGAGAAGGCAGAAAGAGAGGATCAATCAGGTGGAATTGGTGGTGCAGTGTTGTGGTCTATTGGGAGCCTTGTGAGAAAGAATTTGTATAGTTTGGGATTAATTAAATCATGCTCTTAA 1326 0.3997 MEWPACTDEYEKLLLRMSTPRVVIDNVVCSTATLVKVISARRHGSLLDAIQILIDLNLVIKKAYISSDGKWFMDVFHVVDQNGNKLIDESVLKYIEQSLGSVHSVRTSCSNGLTALELSGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGATIDDSQKIKKIEVRLRNVLKGDNDIRTAKTSVSMSVMHSERRLHQMMFADRDYERTPILKLISDDTVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHNDGTPISSEPERQRVIQCLKASVERRASEGVQLELCTEDKKGLLAEVMRTFRENGLNVTRAEISTTGKMATNVFYVTDVIGHQADPKIIESVRQKIGSSSLEVKELPLVYHEKAEREDQSGGIGGAVLWSIGSLVRKNLYSLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03768 441 CDD ACT_ACR_3 244 318 - -
Vivi2g03768 441 CDD ACT_ACR_2 114 187 - -
Vivi2g03768 441 Pfam ACT domain 325 384 IPR002912 -
Vivi2g03768 441 Pfam ACT domain 115 165 IPR002912 -
Vivi2g03768 441 SUPERFAMILY ACT-like 111 172 IPR045865 -
Vivi2g03768 441 SUPERFAMILY ACT-like 320 388 IPR045865 -
Vivi2g03768 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Vivi2g03768 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Vivi2g03768 441 CDD ACT_ACR_4 322 393 - -
Vivi2g03768 441 Gene3D - 113 188 - -
Vivi2g03768 441 Gene3D - 322 392 - -
Vivi2g03768 441 ProSiteProfiles ACT domain profile. 115 192 IPR002912 -
Vivi2g03768 441 SUPERFAMILY ACT-like 29 100 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03768 Vivi-Chr2 148844689 148847506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03768 - - gmx:100806283 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03768 2 148844689 148847506 Vivi2g03768 2 148844689 148847506 ECH