Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03704 ATGAGTACTCCTACGAAGACGAGCCGTGAAAGAGACAGAGATATTACTATAACGAGAAGTGATAGAAAAGATGAATCGTCTTCTAGTGTTAAGCGGTCGAAGTTTAAGTCTGGTGGTAGTGGCGGAATAACAAAATCAATTCATCCTCCGATTGAATCGCATTGGGATCTTCCTACACCAAAAGGGAAGAAAAGAGCTTCCTTCTCCATCAAGTCAATGCTGTCTTACCCTCTTACGAAATTTGGAAGGAGTAAAAGTATGGAAATGGTTCTAGGAGGAACTCATGATCCAAAGGATGAGCAAATCGTTGAGAATTTTCGCGAAATGCTTTCACGCGATGGCCTATTACCGCCTAAACACAACGATTATCATACTCTTCTAAGGTTTCTGCGCATGAACGATTTTGATATGACAATATCCAAAGATATGTTTCTCAATTATCTGAAATGGCGAAAGGAATTTCGAGTCGATATGATTCATGAGGAATTCAAATTCACAGAATACACAGAAGTGAAGAAATGCTACCCTCATGGATACCATGGAGTTGATAAATGTGGCAGACCTGTGTATATTGAAAGACTTGGGATGATTGATGTTAACAAACTGTGGCAAGTAACAACACATGAAAGATTTATAAAGCATCATGTGTTAGAACAAGAGAAAACGCTACGATTACGATACCCTGCATGTTCATTAGCAGCTAAAAGACACATAGCTTCCACCACAAGTATCTTGGATGTCAGCGGAATAGGAATGTCTAATTTCTCAAAGCCCGCAAGGTACTTGTTTATGGAAATTCAGAAGATCGATAGCAGTTACTATCCTGAGACTCTAAATAAACTCTTCATTGTTAATGCTGGTTCTGGATTTAAGATATTGTGGAAAGCAGTGAAGGCATTCCTAAGCGAACGGACAGTAATGAAAATTCAAGTTTTGGGTTTTGATTATGCTAGTGTGTTGCTAGAGGCTATTGATCCAAGTAACTTGCCAACTTTTTTGGGTGGTAATTGCATATGTTCTGAGTATGGAGGTTGCTTGATGAGTGATCAAGGTCCATGGAAAAATCAAGAGATCTTAGAAATGATTCAGACAGTTTCTTTAACAGAAGAAACTGACGGTGTGAGTGAAAACAACATTATGGTTTCAGAAGGATCCTTGATGCACAAAAAGGTTGACATGCAAAACAAAGACGATGTTAGAACAGATCTACCATGTAGGATAGCGTTACAAAAGATTGATTGCCTTGAAAATAGTCTTGGAGACATCAAGAATAAAATCAAGACATTGGAAGATGCACTTCAAGAAACTAAGATGGCATTGAAAGAACTTGGACAATATATAGAACAGCAAAAAATGTGA 1359 0.3812 MSTPTKTSRERDRDITITRSDRKDESSSSVKRSKFKSGGSGGITKSIHPPIESHWDLPTPKGKKRASFSIKSMLSYPLTKFGRSKSMEMVLGGTHDPKDEQIVENFREMLSRDGLLPPKHNDYHTLLRFLRMNDFDMTISKDMFLNYLKWRKEFRVDMIHEEFKFTEYTEVKKCYPHGYHGVDKCGRPVYIERLGMIDVNKLWQVTTHERFIKHHVLEQEKTLRLRYPACSLAAKRHIASTTSILDVSGIGMSNFSKPARYLFMEIQKIDSSYYPETLNKLFIVNAGSGFKILWKAVKAFLSERTVMKIQVLGFDYASVLLEAIDPSNLPTFLGGNCICSEYGGCLMSDQGPWKNQEILEMIQTVSLTEETDGVSENNIMVSEGSLMHKKVDMQNKDDVRTDLPCRIALQKIDCLENSLGDIKNKIKTLEDALQETKMALKELGQYIEQQKM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03704 452 Gene3D - 75 154 - -
Vivi2g03704 452 PRINTS Cellular retinaldehyde-binding protein signature 294 313 - -
Vivi2g03704 452 PRINTS Cellular retinaldehyde-binding protein signature 327 336 - -
Vivi2g03704 452 PRINTS Cellular retinaldehyde-binding protein signature 125 147 - -
Vivi2g03704 452 CDD SEC14 168 336 IPR001251 -
Vivi2g03704 452 Pfam CRAL/TRIO domain 175 335 IPR001251 -
Vivi2g03704 452 MobiDBLite consensus disorder prediction 1 61 - -
Vivi2g03704 452 SMART CRAL_TRIO_N_2 122 147 IPR011074 -
Vivi2g03704 452 SMART sec14_4 167 338 IPR001251 -
Vivi2g03704 452 SUPERFAMILY CRAL/TRIO domain 167 362 IPR036865 -
Vivi2g03704 452 Gene3D - 155 366 IPR036865 -
Vivi2g03704 452 Coils Coil 412 439 - -
Vivi2g03704 452 MobiDBLite consensus disorder prediction 1 31 - -
Vivi2g03704 452 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 167 341 IPR001251 -
Vivi2g03704 452 SUPERFAMILY CRAL/TRIO N-terminal domain 94 162 IPR036273 -
Vivi2g03704 452 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 63 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03704 Vivi-Chr2 147299491 147303408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03704 120 332 Acyl Lipid Metabolism Gene Families AT1G55840 31.336 1.35e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03704 K26544 - gmx:100797170 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03704 2 147299491 147303408 Vivi2g03704 2 147299491 147303408 ECH