Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03702 ATGTCTTCTCCCATGTTGCTACTATTACTACCACTACTCTGTTTCATACTCTGTTTTTCACCTTCATCTCAAACCATTCTATTACCCTTAACACACTTAATCTCCAAAACCCAATTCAACACTACCCACCACCTCCTCAAATCAACCTCAACCCGTTCCACAAAACGCTTCCACCACCAACACAACAACCACCACAAAACTCAACCCCAACTTTCTCTCCCACTTTCTCCCGGTAGCGATTACACCCTCTCCTTCAACCTAGGCTCACACCCTCCACAGCTCATAACTCTCTACATGGACACAGGCAGCGACCTCGTCTGGTTCCCTTGCTCCCCCTTCGAATGCATCCTCTGTGAAGGAAAACCACAAACCACAAAACCCGCTAACATCACAAAAGCACACTCTGTCTCATGTCAATCCCCTGCATGTTCCGCTTCACACGCAACCCTCTCTTCTAGCAATCTCTGTGCTATCTCTCGTTGCCCTTTGGACTTCATTGAAACTTCCGATTGTTCTTCTTTCTCTTGTCCACCTTTTTACTACGCTTACGGCGACGGAAGCTTCGTCGCTAATCTCTATCGTCACACACTTTCCCTCTCTTCTCTTCTTCTTCATAACTTCACGTTTGGTTGTGCTCATACCGCCCTCGCTGAACCCACCGGCGTCGCGGGTTTCGGCCGTGGGATTCTCTCTCTCCCTGCTCAGCTCTCCACTCTCTCACCTCATCTCGGTAATCGTTTTTCTTATTGTTTGGTTTCTCATTCCTTCGACGGTGACCGAGTTAAACAGCCGAGTCCACTCATTCTCGGTCGTCATGATACTACCACCGGAGAAGAAGAAGATATTGAGTTTGCCTACACTTCCATGCTTTCGAATCCTAAGCATCCTTATTACTACTGCGTTGGGCTCGCCGGGATATCCGTCGGGAAGAAAAATGTCCCGGCGCCGGAGATTCTCAAAAGCGTTGACGAGAAAGGTAACGGCGGGATGGTTGTTGATTCCGGAACGACGTTTACGATGTTGCCGGAGAGTTTTTACAACGCGGTGGTTGCTGAGTTCGATAAACGAGTTGGACGAGTTCACAAACGAGCGAGTGAGGTTGAAACGAAAACGGGTCTTTCACCGTGTTATTATTTAAACGGGTTATCGAAAATACCAACGATGACGTTGCATTTTGTTGGGAATGGTTCGGGTGTGGTGTTGCCTAGGAAGAATTATTTTTATGAGTTTTTGGACGGTGGAGATGGGGTGAGAGGGAAAGGGAAAGTGGGGTGTATGATGCTGATGAACGGTGGTGATGAAACTGAGTTAGATGGTGGACCTGGAGCGACACTTGGGAATTATCAACAGCAAGGATTTGAAGTAGTGTATGATTTGGAGAAAGAGCGCGTGGGTTTTGCAAAGAAAGAGTGCGCGTTGCTTTGGGATAGTCTCAACAGTGAGAAAAACTAA 1452 0.4752 MSSPMLLLLLPLLCFILCFSPSSQTILLPLTHLISKTQFNTTHHLLKSTSTRSTKRFHHQHNNHHKTQPQLSLPLSPGSDYTLSFNLGSHPPQLITLYMDTGSDLVWFPCSPFECILCEGKPQTTKPANITKAHSVSCQSPACSASHATLSSSNLCAISRCPLDFIETSDCSSFSCPPFYYAYGDGSFVANLYRHTLSLSSLLLHNFTFGCAHTALAEPTGVAGFGRGILSLPAQLSTLSPHLGNRFSYCLVSHSFDGDRVKQPSPLILGRHDTTTGEEEDIEFAYTSMLSNPKHPYYYCVGLAGISVGKKNVPAPEILKSVDEKGNGGMVVDSGTTFTMLPESFYNAVVAEFDKRVGRVHKRASEVETKTGLSPCYYLNGLSKIPTMTLHFVGNGSGVVLPRKNYFYEFLDGGDGVRGKGKVGCMMLMNGGDETELDGGPGATLGNYQQQGFEVVYDLEKERVGFAKKECALLWDSLNSEKN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03702 483 FunFam Probable aspartyl protease At4g16563 71 269 - -
Vivi2g03702 483 Gene3D Acid Proteases 48 270 IPR021109 -
Vivi2g03702 483 Pfam Xylanase inhibitor N-terminal 81 257 IPR032861 -
Vivi2g03702 483 CDD pepsin_A_like_plant 81 471 IPR034161 -
Vivi2g03702 483 PANTHER ASPARTYL PROTEASES 7 465 IPR001461 GO:0004190|GO:0006508
Vivi2g03702 483 SUPERFAMILY Acid proteases 76 476 IPR021109 -
Vivi2g03702 483 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 330 341 IPR001969 GO:0004190|GO:0006508
Vivi2g03702 483 Gene3D Acid Proteases 274 475 IPR021109 -
Vivi2g03702 483 ProSiteProfiles Peptidase family A1 domain profile. 81 467 IPR033121 -
Vivi2g03702 483 Pfam Xylanase inhibitor C-terminal 299 467 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03702 Vivi-Chr2 147279431 147281203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03702 81 474 Miscellaneous Gene Families AT1G77480 25.837 1.54e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03702 - - gmx:100807884 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03702 2 147279431 147281203 Vivi2g03702 2 147279431 147281203 ECH