Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03650 ATGGCTTCTCAAGTTTTTCTTCAGGCTCTGTTTGCTCCTACGCAATCTCTTCCGAACAAGCTATGTTTCTCTTCTCCTTCCTCCGCTTCCACATTCGGTTCTCGTAACTTGCCGTTGATTTCAACAACCTCAATTTCACGGCGTTGCAGTCCTCTCATTGCTAAGCCTACTTTTGTTGTTAGAGTTGATTCCAATCCCGATGCTGCTTCGGCTTCGGATGTAGAAGATGAAGTTCCGGAAACTGATGCTGAAGAGGTTTCGGAATCTAATCCAGAGGTTGAAGAATTGAAGCCACCAAGACAAACTCGGGTCAAACTTGGTGATGTTATGGGGATATTGCATAAGAGGGCAATTGAGGCTTCGGATGAAGTGAGGGTCACTCCTGACCTTAGGACTGGAGATATTATTGAAATCAGATTGGAAGTTCCTGAGAACAAGCGTAGATTATCTGTTTACAAAGGTATTGTAATCGCCAGACAAAATGCTGGTATTCACACCACTATTCGAGTCCGAAGAATTATTGCTGGCACTGGTGTTGAGATAACCTTCCCAATTTACTCACCAAACATCAAAGAAATCAAAGTGGTGAAGCACCGAAAGGTCAGGCAGGCAAGATTGTATTATCTAAAACACAAGCTCCCCAGATTCTCCACTTTCAAATGA 663 0.4344 MASQVFLQALFAPTQSLPNKLCFSSPSSASTFGSRNLPLISTTSISRRCSPLIAKPTFVVRVDSNPDAASASDVEDEVPETDAEEVSESNPEVEELKPPRQTRVKLGDVMGILHKRAIEASDEVRVTPDLRTGDIIEIRLEVPENKRRLSVYKGIVIARQNAGIHTTIRVRRIIAGTGVEITFPIYSPNIKEIKVVKHRKVRQARLYYLKHKLPRFSTFK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03650 220 MobiDBLite consensus disorder prediction 73 89 - -
Vivi2g03650 220 SUPERFAMILY Translation proteins SH3-like domain 118 220 IPR008991 -
Vivi2g03650 220 MobiDBLite consensus disorder prediction 67 98 - -
Vivi2g03650 220 Gene3D - 76 218 IPR038657 -
Vivi2g03650 220 NCBIfam 50S ribosomal protein L19 124 212 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vivi2g03650 220 FunFam 50S ribosomal protein L19, chloroplastic 107 219 - -
Vivi2g03650 220 Pfam Ribosomal protein L19 119 213 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vivi2g03650 220 PANTHER RIBOSOMAL PROTEIN L19 29 220 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vivi2g03650 220 PRINTS Ribosomal protein L19 signature 114 143 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vivi2g03650 220 PRINTS Ribosomal protein L19 signature 173 196 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03650 Vivi-Chr2 146019184 146021408 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03650 K02884 - gmx:100500328 264.618