Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03635 ATGGGTTGTGTATCCTCTAAAGTAAGAACATATCTAGGACATGAAGATCCATTCATTCTTGCATCAGAAACGACTTTTAGTGTATGTGAAGTTGAAGCATTATTTGAACTTTTTAAGAGCATAAGTAGGTCTGTCATTGATGATGGACTAATAAGCAAGGAAGAATTTCAATTGGCAATTTTCAATAATAGAACAAAGGAAAATCTATTTGCGAATCGGATCTTTGATCTATTTGATGTCAAAGGGAAAGGAGTAATTGACTTTGGTGATTTTGTTAGAGCACTCAATGTGTTTCACCCAAATACATCCCAAGAAGTCAAGATAGATTTTTCATTCAGGCTTTATGATTTGGATAATTCAGGCTTTATAGAGCGTCATGAAGTGAAAGAAATGATAAATGCAATTTTATGTGAATCTGAAATTAAGTTGAGTGATGATATGATAGAAACAATTATTGAGAAGACTTTCTTGGATGCTGACCCAAATCAAGATGGAAAAATAGACAAATCCGAGTGGAAAATCTTTGTTTCTAAAAACATGTCATTGCTAAAAATCATGACACTACCCTATCTAAAGGACATAACAACATCTTTTCCTAGTTTTGTATTTAACACAAAATTGGATGATGACATTGTTGTTACATGA 645 0.324 MGCVSSKVRTYLGHEDPFILASETTFSVCEVEALFELFKSISRSVIDDGLISKEEFQLAIFNNRTKENLFANRIFDLFDVKGKGVIDFGDFVRALNVFHPNTSQEVKIDFSFRLYDLDNSGFIERHEVKEMINAILCESEIKLSDDMIETIIEKTFLDADPNQDGKIDKSEWKIFVSKNMSLLKIMTLPYLKDITTSFPSFVFNTKLDDDIVVT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03635 214 SUPERFAMILY EF-hand 20 201 IPR011992 -
Vivi2g03635 214 ProSitePatterns EF-hand calcium-binding domain. 160 172 IPR018247 -
Vivi2g03635 214 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Vivi2g03635 214 FunFam calcineurin B-like protein 3 16 209 - -
Vivi2g03635 214 ProSitePatterns EF-hand calcium-binding domain. 116 128 IPR018247 -
Vivi2g03635 214 PRINTS Recoverin family signature 121 139 - -
Vivi2g03635 214 PRINTS Recoverin family signature 74 95 - -
Vivi2g03635 214 Pfam EF-hand domain pair 107 172 IPR002048 GO:0005509
Vivi2g03635 214 CDD EFh 107 172 IPR002048 GO:0005509
Vivi2g03635 214 Gene3D - 17 210 - -
Vivi2g03635 214 CDD EFh 73 132 IPR002048 GO:0005509
Vivi2g03635 214 SMART efh_1 151 179 IPR002048 GO:0005509
Vivi2g03635 214 SMART efh_1 107 135 IPR002048 GO:0005509
Vivi2g03635 214 SMART efh_1 70 98 IPR002048 GO:0005509
Vivi2g03635 214 ProSiteProfiles EF-hand calcium-binding domain profile. 103 138 IPR002048 GO:0005509
Vivi2g03635 214 ProSiteProfiles EF-hand calcium-binding domain profile. 147 182 IPR002048 GO:0005509
Vivi2g03635 214 PANTHER CALCINEURIN B 2 208 IPR045198 GO:0005509|GO:0019722|GO:0019900
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03635 Vivi-Chr2 145615545 145620174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03635 1 209 EF-hand Containing Proteins AT4G17615 72.381 1.50e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03635 K06268 - rcu:8276057 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03635 2 145615545 145620174 Vivi2g03635 2 145615545 145620174 ECH
Vivi2g03635 2 145615545 145620174 Vivi1g02593 1 54641835 54645532 PCT