Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03617 ATGTTATCACGCCAATTTAAAGCAACTGCCGTGGAGCTTATATCTGTTCTGGAGCAGAAACAAAGTACTGGTGGAAGGACAAAAGTTCTTTTGGAGACTGTTCCTGTTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGTTTTGAAGAACAATTATCAATGTTGGATTCTGTTGATGCTAAAGAGAGGCTTTCTAAAGCAACTGAATTGGTTGATAGGCACTTACAGTCAATACGCGTTGCTGAGAAGATAACACAAAAAGTTGAAGGACAATTGTCAAAATCTCAAAAAGAATTTCTTCTGCGCCAGCAGATGAAGGCTATAAAAGAGGAACTCGGTGATAATGATGATGAGGAGGATGACCTGGCTGCCCTGGAAAGGAAGATGCAAAGTGCAGGAATGCCACAAAATACTTGGAAGCTTGCTCTTAGAGAGTTAAGGAGATTGAAAAAAATGCAGCCTCAGCAACCTGGTTATAGCAGTTCACGGGCTTACTTGGAACTTCTGTCTGATCTGCCATGGCAGAAGACCAGCAAAGAGCATGAATTGGACTTAAGAGCGGCACAGGAGCGCCTGGACAATGATCACTATGGTTTAGTGAAGGTCAAACAACGGATCATTGAATACCTAGCTGTTCGCAAGCTTAAGCCAGATGCCAGAGGTCCTGTGTTGTGCTTCGTTGGTCCTCCTGGTGTAGGGAAAACATCATTGGCATCTTCTATTGCTGCTGCTCTAGACCGAAAATTTGTGCGGATATCTCTTGGTGGAGTAAAGGATGAGGCTGATATAAGAGGACATAGGAGAACATACATTGGAAGCATGCCTGGGAGGCTTATAGATGGACTGAAGAAAGTAGCTGTTTGCAATCCTGTCATGTTGCTAGATGAAATTGACAAGACAGGTTCTGATGTCCGTGGGGATCCAGCTTCAGCGTTGCTAGAGGTTCTTGATCCTGAACAAAATAAAACATTCAATGATCACTATTTGAATGTTCCATTCGATCTATCCAAGGTAATTTTTGTTGCTACAGCAAATAGGGCGCAACCTATTCCTCCACCTCTCCTTGACAGGATGGAAGTCATTGAGCTTCCTGGGTATACACCTGAGGAAAAGCTTAAAATAGCCATGCGGCATTTAATTCCTAGAGTTCTGGACCAACATGGTCTGAGTTCTGAGTTCCTTCAAATTCCAAAGGCGATGGTGCAACTTGTTATTCAGAGATATACGAGGGAAGCTGGTGTTCGAAGTTTGGAAAGGAATCTAGCTGCTCTTGCTCGTGCTGCTGCCGTGAGAGTAGCAGAGCAAGAAGTAGTTCCACTTAACAAGGGAGTAGAGGGACTTACCACACCACTTCTGGAAAACAGACTTGTCGATAACGCTGAAGTGGAAATGGAAGTGATACCAATGGGTGTCAACAACCGTGACATTTCAAACACATTCAGGATCACCTCTCCATTGGTTGTTGATGAAGCTATGGTTGAAAAAGTGCTTGGGCCTCCAAAGTTTGATGGAAGAGAAACAGCAGAACGTGTTGTGACCCCTGGGATATCTGTTGGTCTGGTTTGGACTACTTTTGGTGGAGAAGTTCAGTTTGTGGAGGCTTCAACAATGGCAGGGAAGGGTGAATTGCATCTTACTGGACAACTTGGTGATGTAATCAAAGAATCAGCTCAAATTGCACTAACATGGGTAAGAGCAAGATCAGCTGATCTCAAACTTGCTGCTTCAGATGGCATTAATCTGTTGGAGGGGCGTGATATACATATACATTTCCCTGCAGGTGCAGTACCTAAAGATGGGCCTTCAGCTGGTGTGACTTTAGTCACAGCATTGGTTTCACTTTTCAGTCAGAGGAAAGTGAGATCTGATACCGCTATGACTGGAGAGATGACGTTGAGGGGTCTAGTATTACCAGTTGGTGGTATCAAGGATAAGATACTAGCTGCACATCGATATGGTATTAAGAGAGTCATCCTACCTGAAAGGAACTTAAAGGACTTGGTTGAAGTGCCACCATCAGTACTAGCCAATTTGGAGATACTGCTTGCAAAACGAATGGAGGATGTGTTAGAACAAGCTTTTGACAGTGGGAGCCCTTGGAGACAACACTCAAAGTTGTAA 2130 0.4371 MLSRQFKATAVELISVLEQKQSTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAKERLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMKAIKEELGDNDDEEDDLAALERKMQSAGMPQNTWKLALRELRRLKKMQPQQPGYSSSRAYLELLSDLPWQKTSKEHELDLRAAQERLDNDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKKVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLKIAMRHLIPRVLDQHGLSSEFLQIPKAMVQLVIQRYTREAGVRSLERNLAALARAAAVRVAEQEVVPLNKGVEGLTTPLLENRLVDNAEVEMEVIPMGVNNRDISNTFRITSPLVVDEAMVEKVLGPPKFDGRETAERVVTPGISVGLVWTTFGGEVQFVEASTMAGKGELHLTGQLGDVIKESAQIALTWVRARSADLKLAASDGINLLEGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQRKVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPERNLKDLVEVPPSVLANLEILLAKRMEDVLEQAFDSGSPWRQHSKL 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03617 709 FunFam Lon protease homolog 2, peroxisomal 188 366 - -
Vivi2g03617 709 PIRSF Lon_proteas 2 476 IPR004815 GO:0004176|GO:0005524|GO:0006508
Vivi2g03617 709 PIRSF Lon_proteas 460 700 IPR004815 GO:0004176|GO:0005524|GO:0006508
Vivi2g03617 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 439 IPR027417 -
Vivi2g03617 709 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 231 250 - -
Vivi2g03617 709 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 517 533 - -
Vivi2g03617 709 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 629 648 - -
Vivi2g03617 709 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 599 618 - -
Vivi2g03617 709 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 652 670 - -
Vivi2g03617 709 NCBIfam endopeptidase La 2 697 IPR004815 GO:0004176|GO:0005524|GO:0006508
Vivi2g03617 709 Gene3D - 367 505 - -
Vivi2g03617 709 ProSiteProfiles Lon proteolytic domain profile. 514 699 IPR008269 GO:0004176|GO:0004252|GO:0006508
Vivi2g03617 709 Pfam ATPase family associated with various cellular activities (AAA) 227 364 IPR003959 GO:0005524|GO:0016887
Vivi2g03617 709 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 602 610 IPR008268 GO:0004176|GO:0004252|GO:0006508
Vivi2g03617 709 Gene3D - 2 119 - -
Vivi2g03617 709 Gene3D - 127 175 - -
Vivi2g03617 709 Coils Coil 111 131 - -
Vivi2g03617 709 CDD RecA-like_Lon 188 369 - -
Vivi2g03617 709 Pfam Lon protease (S16) C-terminal proteolytic domain 491 697 IPR008269 GO:0004176|GO:0004252|GO:0006508
Vivi2g03617 709 Gene3D - 188 366 IPR027417 -
Vivi2g03617 709 SUPERFAMILY Ribosomal protein S5 domain 2-like 517 697 IPR020568 -
Vivi2g03617 709 SMART AAA_5 223 368 IPR003593 GO:0016887
Vivi2g03617 709 FunFam Lon protease homolog 2, peroxisomal 1 119 - -
Vivi2g03617 709 FunFam Lon protease homolog 2, peroxisomal 511 702 - -
Vivi2g03617 709 Gene3D - 516 706 IPR014721 -
Vivi2g03617 709 FunFam Lon protease homolog 126 175 - -
Vivi2g03617 709 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 2 703 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03617 Vivi-Chr2 144941596 144957436 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03617 K01338 - gmx:100796650 1228