Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03616 ATGGCGGATTCGGTGGAGCTTCCGAGTCGGTTAGCAATACTTCCGTTCAGAAACAAAGTCCTCTTACCTGGCGCCATCATCCGAATTCGTTGCACTTCTCCTACGAGTGTGAAGTTGGTGGAACAAGAACTCTGGCAGCGAGAAGAGAAAGGTTTGATTGGCATATTGCCAGTACGCGATGCTGCTGCTGATACTAAGCTACTGGGTTCTAGTACTGTATCTCAAGGTGCAGATTCGCTAGACCAAAACTCCAAAGTTCATGGTGGTTCATCAGATTCTCAAACCAAAAATCAGAATGATGTTGTTCATTGGCATAACAGAGGGGTAGCTGCTCGAGCATTACACTTATCCAGGGGAGTGGAGAAACCAAGTGGGAGAGTAACATATATAGTTGTTCTTGAAGGTTTGTGCAGATTTAGTGTCCAGGAACTAAGCACAAGAGGAACATACCATACTGCAAAAATCTCTTCCCTTGAGATGACTAAGACCGAGATGGAACAGGTGGAGCATGACCCGAATTTCATAATGTTATCACGCCAATTTAAAGCAACTGCCGTGGAGCTTATATCTGTTCTGGAGCAGAAACAAAGTACTGGTGGAAGGACAAAAGTTCTTTTGGAGACTGTTCCTGTTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGTTTTGAAGAACAATTATCAATGTTGGATTCTGTTGATGCTAAAGAGAGGCTTTCTAAAGCAACTGAATTGGTTGATAGGCACTTACAGTCAATACGCGTTGCTGAGAAGATAACACAAAAAGTTGAAGGACAATTGTCAAAATCTCAAAAAGAATTTCTTCTGCGCCAGCAGATGAAGGCTATAAAAGAGGAACTCGGTGATAATGATGATGAGGAGGATGACCTGGCTGCCCTGGAAAGGAAGATGCAAAGTGCAGGAATGCCACAAAATACTTGGAAGCTTGCTCTTAGAGAGTTAAGGAGATTGAAAAAAATGCAGCCTCAGCAACCTGGTTATAGCAGTTCACGGGCTTACTTGGAACTTCTGTCTGATCTGCCATGGCAGAAGACCAGCAAAGAGCATGAATTGGACTTAAGAGCGGCACAGGAGCGCCTGGACAATGATCACTATGGTTTAGTGAAGGTCAAACAACGGATCATTGAATACCTAGCTGTTCGCAAGCTTAAGCCAGATGCCAGAGGTCCTGTGTTGTGCTTCGTTGGTCCTCCTGGTGTAGGGAAAACATCATTGGCATCTTCTATTGCTGCTGCTCTAGACCGAAAATTTGTGCGGATATCTCTTGGTGGAGTAAAGGATGAGGCTGATATAAGAGGACATAGGAGAACATACATTGGAAGCATGCCTGGGAGGCTTATAGATGGACTGAAGAAAGTAGCTGTTTGCAATCCTGTCATGTTGCTAGATGAAATTGACAAGACAGGTTCTGATGTCCGTGGGGATCCAGCTTCAGCGTTGCTAGAGGTTCTTGATCCTGAACAAAATAAAACATTCAATGATCACTATTTGAATGTTCCATTCGATCTATCCAAGGTAATTTTTGTTGCTACAGCAAATAGGGCGCAACCTATTCCTCCACCTCTCCTTGACAGGATGGAAGTCATTGAGCTTCCTGGGTATACACCTGAGGAAAAGCTTAAAATAGCCATGCGGCATTTAATTCCTAGAGTTCTGGACCAACATGGTCTGAGTTCTGAGTTCCTTCAAATTCCAAAGGCGATGGTGCAACTTGTTATTCAGAGATATACGAGGGAAGCTGGTGTTCGAAGTTTGGAAAGGAATCTAGCTGCTCTTGCTCGTGCTGCTGCCGTGAGAGTAGCAGAGCAAGAAGTAGTTCCACTTAACAAGGGAGTAGAGGGACTTACCACACCACTTCTGGAAAACAGACTTGTCGATAACGCTGAAGTGGAAATGGAAGTGATACCAATGGGTGTCAACAACCGTGACATTTCAAACACATTCAGGATCACCTCTCCATTGGTTGTTGATGAAGCTATGGTTGAAAAAGTGCTTGGGCCTCCAAAGTTTGATGGAAGAGAAACAGCAGAACGTGTTGTGACCCCTGGGATATCTGTTGGTCTGGTTTGGACTACTTTTGGTGGAGAAGTTCAGTTTGTGGAGGCTTCAACAATGGCAGGGAAGGGTGAATTGCATCTTACTGGACAACTTGGTGATGTAATCAAAGAATCAGCTCAAATTGCACTAACATGGGTAAGAGCAAGATCAGCTGATCTCAAACTTGCTGCTTCAGATGGCATTAATCTGTTGGAGGGGCGTGATATACATATACATTTCCCTGCAGGTGCAGTACCTAAAGATGGGCCTTCAGCTGGTGTGACTTTAGTCACAGCATTGGTTTCACTTTTCAGTCAGAGGAAAGTGAGATCTGATACCGCTATGACTGGAGAGATGACGTTGAGGGGTCTAGTATTACCAGTTGGTGGTATCAAGGATAAGATACTAGCTGCACATCGATATGGTATTAAGAGAGTCATCCTACCTGAAAGGAACTTAAAGGACTTGGTTGAAGTGCCACCATCAGTACTAGCCAATTTGGAGATACTGCTTGCAAAACGAATGGAGGATGTGTTAGAACAAGCTTTTGACAGTGGGAGCCCTTGGAGACAACACTCAAAGTTGTAA 2655 0.4403 MADSVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGLIGILPVRDAAADTKLLGSSTVSQGADSLDQNSKVHGGSSDSQTKNQNDVVHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTAKISSLEMTKTEMEQVEHDPNFIMLSRQFKATAVELISVLEQKQSTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAKERLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMKAIKEELGDNDDEEDDLAALERKMQSAGMPQNTWKLALRELRRLKKMQPQQPGYSSSRAYLELLSDLPWQKTSKEHELDLRAAQERLDNDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKKVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLKIAMRHLIPRVLDQHGLSSEFLQIPKAMVQLVIQRYTREAGVRSLERNLAALARAAAVRVAEQEVVPLNKGVEGLTTPLLENRLVDNAEVEMEVIPMGVNNRDISNTFRITSPLVVDEAMVEKVLGPPKFDGRETAERVVTPGISVGLVWTTFGGEVQFVEASTMAGKGELHLTGQLGDVIKESAQIALTWVRARSADLKLAASDGINLLEGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQRKVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPERNLKDLVEVPPSVLANLEILLAKRMEDVLEQAFDSGSPWRQHSKL 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03616 884 SMART AAA_5 398 543 IPR003593 GO:0016887
Vivi2g03616 884 Gene3D - 542 680 - -
Vivi2g03616 884 CDD RecA-like_Lon 363 544 - -
Vivi2g03616 884 SMART lon_5 10 251 IPR003111 -
Vivi2g03616 884 Gene3D - 2 159 IPR046336 -
Vivi2g03616 884 FunFam Lon protease homolog 301 350 - -
Vivi2g03616 884 Pfam Lon protease (S16) C-terminal proteolytic domain 666 872 IPR008269 GO:0004176|GO:0004252|GO:0006508
Vivi2g03616 884 SUPERFAMILY PUA domain-like 10 250 IPR015947 -
Vivi2g03616 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 614 IPR027417 -
Vivi2g03616 884 Gene3D - 363 541 IPR027417 -
Vivi2g03616 884 SUPERFAMILY Ribosomal protein S5 domain 2-like 692 872 IPR020568 -
Vivi2g03616 884 Gene3D - 302 350 - -
Vivi2g03616 884 Gene3D - 171 294 - -
Vivi2g03616 884 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 777 785 IPR008268 GO:0004176|GO:0004252|GO:0006508
Vivi2g03616 884 Coils Coil 286 306 - -
Vivi2g03616 884 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 251 IPR003111 -
Vivi2g03616 884 Gene3D - 691 881 IPR014721 -
Vivi2g03616 884 FunFam Lon protease homolog 2, peroxisomal 363 541 - -
Vivi2g03616 884 ProSiteProfiles Lon N-terminal domain profile. 11 251 IPR003111 -
Vivi2g03616 884 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 827 845 - -
Vivi2g03616 884 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 774 793 - -
Vivi2g03616 884 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 406 425 - -
Vivi2g03616 884 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 804 823 - -
Vivi2g03616 884 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 692 708 - -
Vivi2g03616 884 FunFam Lon protease homolog 2, peroxisomal 169 294 - -
Vivi2g03616 884 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 884 IPR027501 GO:0004252|GO:0006515
Vivi2g03616 884 NCBIfam endopeptidase La 13 872 IPR004815 GO:0004176|GO:0005524|GO:0006508
Vivi2g03616 884 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 8 878 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Vivi2g03616 884 MobiDBLite consensus disorder prediction 73 98 - -
Vivi2g03616 884 PIRSF Lon_proteas 649 875 IPR004815 GO:0004176|GO:0005524|GO:0006508
Vivi2g03616 884 PIRSF Lon_proteas 1 634 IPR004815 GO:0004176|GO:0005524|GO:0006508
Vivi2g03616 884 FunFam Lon protease homolog 2, peroxisomal 686 877 - -
Vivi2g03616 884 ProSiteProfiles Lon proteolytic domain profile. 689 874 IPR008269 GO:0004176|GO:0004252|GO:0006508
Vivi2g03616 884 Pfam ATPase family associated with various cellular activities (AAA) 402 539 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03616 Vivi-Chr2 144941596 144958266 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03616 K01338 - gmx:100796650 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03616 2 144941596 144958266 Vivi2g03616 2 144941596 144958266 ECH