Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03572 ATGGCTACCGCAACGAACTTGTTAGAATCATTAGGCAACTTAGAGAGAGATTCATTCACATCTCTCCTCTCCAACCTCATTGGTGAATCCAGACACGTGCAGAACAATCCTCCGGAACATATTCCTGAAGAGGATAGAGTAGTCAAGCATGTGTTAAACTCACTACTACCCTTCAGCACCACCACCGGCGGTGGTCCCTTAATCCTCAACCATGTTACTTATCTTCCCGGCAGAGGTAACCTTATCGTCGAGTACCCCGGAACTGTTCCCGGCAAGATTCTCTCCTTTGTTGGCTGCCATATGGATGTTGTCACTGCAAATCCCAAAGATTGGGATTTTGATCCGTTTACTTTGAGCATTGATGGTGATAAGCTTAGGGGTCGTGGAACTACTGATTGTTTGGGACATGTGGCACTTGTTGCTGAACTCATGAGGAAGCTTGGTGAAACTAAGCCGAATTTGAAATCAACTGTTGTTGCTGTTTTTATAGCAAATGAAGAGAGTGGTGCTGTAACTGGAGTTGGTATTGATGCACTTGTTCAAGATGGTCTTCTCAATAAGCTCAAAGAAGGTCCCATGTTTTGGATCGACACAGCTGATAAACAACCGTGTATTGGAACGGCTGGTATGATAGCTTGGAAACTTCATGTGACTGGGAAACTTTTTCACAGCGGATTATGTCATAAGGCTATAAATCCACTAGAGCTAGCCATGGATGCTATAAAGGAAATCCAGCTGCAATTTTACAGAGACTTCCCACCGCATCCTCAGGAACAAGTTTATGGGTTTGCAATCCCTTCCACCATGAAACCAACCCAATGGAGTTATCCTGGAGGCGGAATCAATCAAATTCCGGGGGAATGTACTATTTCAGGAGATGTCAGGTTAACTCCATTCTACGATGTGAAAGATGCAACGAAGAAACTTCAAGAATACGTGGATGATATCAATGACAATATACAGAAGCTAGAAGTTCGAGGTCCAGTTTCAAAATATGTCCTACCAGATGAAAACTTAAGGGGAAGAGTTACTCTAACTTTCGATGAGGTTTTACCTGGAATTGCATGTGATCTCAATTCGAGAGGCTTCCATGTTTTATGCAAAGCAACTGAGGAAGTAGTTGGGCATGTAAAGCCTTTCTCAGTTACGGGGAGTTTGCCTCTCATTCGTGAACTTCAGGATGAAGGTTTTGATGTTCAGTCTTGTGGCTATGGTTTGACGGAAACTTACCATGCCAAGAATGAGTATTGTCTATTTACAGATATGTCTCAAGGATACCAGGTGCTAGGGAGCATCATCACTCAGTTAGAAGATTGA 1317 0.432 MATATNLLESLGNLERDSFTSLLSNLIGESRHVQNNPPEHIPEEDRVVKHVLNSLLPFSTTTGGGPLILNHVTYLPGRGNLIVEYPGTVPGKILSFVGCHMDVVTANPKDWDFDPFTLSIDGDKLRGRGTTDCLGHVALVAELMRKLGETKPNLKSTVVAVFIANEESGAVTGVGIDALVQDGLLNKLKEGPMFWIDTADKQPCIGTAGMIAWKLHVTGKLFHSGLCHKAINPLELAMDAIKEIQLQFYRDFPPHPQEQVYGFAIPSTMKPTQWSYPGGGINQIPGECTISGDVRLTPFYDVKDATKKLQEYVDDINDNIQKLEVRGPVSKYVLPDENLRGRVTLTFDEVLPGIACDLNSRGFHVLCKATEEVVGHVKPFSVTGSLPLIRELQDEGFDVQSCGYGLTETYHAKNEYCLFTDMSQGYQVLGSIITQLED 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03572 438 Coils Coil 306 326 - -
Vivi2g03572 438 FunFam Acetylornithine deacetylase, putative 13 204 - -
Vivi2g03572 438 Pfam Peptidase family M20/M25/M40 97 434 IPR002933 GO:0016787
Vivi2g03572 438 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 318 IPR036264 -
Vivi2g03572 438 CDD M20_ArgE-related 14 436 - -
Vivi2g03572 438 Gene3D - 208 326 - -
Vivi2g03572 438 Pfam Peptidase dimerisation domain 205 317 IPR011650 -
Vivi2g03572 438 SUPERFAMILY Zn-dependent exopeptidases 15 436 - -
Vivi2g03572 438 PANTHER ACETYLORNITHINE DEACETYLASE 8 437 - -
Vivi2g03572 438 Gene3D Zn peptidases 14 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03572 Vivi-Chr2 143836823 143839346 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03572 K01438 - gmx:100814676 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03572 2 143836823 143839346 Vivi2g03572 2 143836823 143839346 ECH