Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03221 ATGGTATCCGAATCGGAACTCATCGGCCGCATCCGCGAGTTCCTCGGTAGCTCCGACCTCACCACCACCACAACCACCACCGTCCGCCGTCAGTTAGAGAGCGATTTCGGAATCGATTTGTCTGATCGAAAAGCGTTCATTCGAGAGCAGGTAGACTCGTTCCTTCAAAGCGTTAACCAACCACAAGAAGAAGATGAACCACAAAACGATGACGTAGTAGAAGACGCGGATAAACCTGAACCAAGCCAAGGTTCTGGTTCGAGGGAAGAAAACGAAGAAGAAGAAGTTAAAGAAGATGGTGATAATGAGGAAGAGGAAGAGGCGGAAGAAAAACCTAGGCGAACCAGAAGTGCGAATAAGAAGAAGAAGAACACGAAGAGTAAAAAACGATCTAACAAGTCAGGTGATGAGGTAGTAAAGAAAAAAGGCGGCAATGGTTTTTGTAGAATTTGTAGCCTGTCTCCACAACTTCAGGAATTCACTGGAGCACCGGAGATGGCTAGGACTGAGGTTGTTAAGCAATTGTGGGCCTATATTAGGGAGAAAAATTTGCAAGACCCAAACAATAGGCGAAATATCAATTGTGATGAACCACTGCGTGCTCTTTTTGGTGTGAATTCCATCAATATGTTCCAAATGAATAAAGTATTGGCAAAGCATATCTGGCCGCTGGACTCGGATGATGTTATCCAGGTGAATTCGACACCAAAGGAAAAGCAGAAGAAGCAAAAGAGAGAAGATGATGTTATCCAGGTGAAGTCGACACCAAAGGAAAAGAAGAAGAAGAAGCAAAAGAGAGAAGATGATGATGAGCCGAAAGGAAAGGAAAAACGGCAGAAGGGAGGATCGGGAAAAGGTTTTCTTGCTCCACTTCAACTATCTGATGCCCTTGCGAAGTTCCTTGGAGAAAGTGAATTATCAAGATCTGATGTCATTAAAAGAATGTGGGATTATATAAAAGGAAACAACCTTCAGGATCCTTCTGACAAGAGGCAAATAATATGCGACGAAAAGTTGAAAGAACTCTTTGATGTTGACTCCTTCAATGGCTTCACTGTTACAAAACTGCTGGTGCCTCATTTCATAAAGACATAG 1095 0.4329 MVSESELIGRIREFLGSSDLTTTTTTTVRRQLESDFGIDLSDRKAFIREQVDSFLQSVNQPQEEDEPQNDDVVEDADKPEPSQGSGSREENEEEEVKEDGDNEEEEEAEEKPRRTRSANKKKKNTKSKKRSNKSGDEVVKKKGGNGFCRICSLSPQLQEFTGAPEMARTEVVKQLWAYIREKNLQDPNNRRNINCDEPLRALFGVNSINMFQMNKVLAKHIWPLDSDDVIQVNSTPKEKQKKQKREDDVIQVKSTPKEKKKKKQKREDDDEPKGKEKRQKGGSGKGFLAPLQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQDPSDKRQIICDEKLKELFDVDSFNGFTVTKLLVPHFIKT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03221 364 MobiDBLite consensus disorder prediction 234 282 - -
Vivi2g03221 364 MobiDBLite consensus disorder prediction 74 91 - -
Vivi2g03221 364 Gene3D SWIB/MDM2 domain 281 364 IPR036885 -
Vivi2g03221 364 Gene3D - 1 57 - -
Vivi2g03221 364 SUPERFAMILY DEK C-terminal domain 3 56 - -
Vivi2g03221 364 MobiDBLite consensus disorder prediction 234 288 - -
Vivi2g03221 364 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 1 56 IPR014876 -
Vivi2g03221 364 SMART swib_2 287 364 IPR019835 -
Vivi2g03221 364 SMART swib_2 147 226 IPR019835 -
Vivi2g03221 364 Pfam SWIB/MDM2 domain 151 221 IPR003121 -
Vivi2g03221 364 Pfam SWIB/MDM2 domain 290 361 IPR003121 -
Vivi2g03221 364 SUPERFAMILY SWIB/MDM2 domain 143 225 IPR036885 -
Vivi2g03221 364 CDD SWIB-MDM2_like 151 221 - -
Vivi2g03221 364 MobiDBLite consensus disorder prediction 52 140 - -
Vivi2g03221 364 FunFam Upstream activation factor subunit 277 364 - -
Vivi2g03221 364 ProSiteProfiles SWIB/MDM2 domain profile. 146 223 IPR003121 -
Vivi2g03221 364 CDD SWIB-MDM2_like 291 361 - -
Vivi2g03221 364 Pfam DEK C terminal domain 2 55 IPR014876 -
Vivi2g03221 364 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 6 238 - -
Vivi2g03221 364 Gene3D SWIB/MDM2 domain 141 229 IPR036885 -
Vivi2g03221 364 ProSiteProfiles SWIB/MDM2 domain profile. 286 363 IPR003121 -
Vivi2g03221 364 FunFam Upstream activation factor subunit 140 229 - -
Vivi2g03221 364 SUPERFAMILY SWIB/MDM2 domain 285 363 IPR036885 -
Vivi2g03221 364 MobiDBLite consensus disorder prediction 92 106 - -
Vivi2g03221 364 Coils Coil 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03221 Vivi-Chr2 133857539 133861844 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Vivi2g03221 SWIB 3.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03221 K15223 - gmx:100786835 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03221 2 133857539 133861844 Vivi2g03221 2 133857539 133861844 ECH