Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03210 ATGTCTGAATTCAACATGAACCAAAAACAACAGAACCATTTTGTTCTTGTTCATGGTATTTGCATGGGTGCCTGGTGTTGGTACAAACTCAAACCACAATTAGAATCTATCGGTCACAAAGTAACAGCACTTGATCTTGCAGCTTGTGGCATCAACACACAAAAAATAGAAGATGTTCATACTTTTGCTGACTATGCTAAACCTTTGTTAGAGTTTTTTGCATCACTTGATCCAAAAGAAAAAGTGATTCTTGTAGGACATAGCTTTGGTGGAATGAGTATAGCTCTTGCAATGGAAAAATTCCCAGAAAAAGTTGCAATTGGAATTTTCATAGCAGCTTTTATTCCTGATACCCTACATCAACCATCCTATGTACTTCAACAGAATATTGAAAGATATCCAGTGAGTGGATGGTTAGACACTGAGATTTCGTATGATGAAAGCAAGATGATAGTGCTTCCTGGCTTAAAACTCTTGTCCACTAAATTCTTCCAACTATGCTCCACTGAGGATTTTGAATTATTGAAGACTTTAAGAAGGAGAGGGTCACTTTTTATCGAGGATCTATCAGAGGTAGATAATCTTTCTAAAGAGAGATATGAATCGGTTCCGCGTGCTTATATTGTTGCCGATGAGGACTTAGCAATTCCAGTAGAGTTTCAAGAATGGATGATACAAAATGCTGGAATTGATGTTGTGAATGTGATGAATGGAGCTGATCATATGGCTATGCTTTCTAAACCTCAAGAACTTTGTTTGTCTCTCCTTGATATTGTTAATAAATATGTTATATAA 795 0.3635 MSEFNMNQKQQNHFVLVHGICMGAWCWYKLKPQLESIGHKVTALDLAACGINTQKIEDVHTFADYAKPLLEFFASLDPKEKVILVGHSFGGMSIALAMEKFPEKVAIGIFIAAFIPDTLHQPSYVLQQNIERYPVSGWLDTEISYDESKMIVLPGLKLLSTKFFQLCSTEDFELLKTLRRRGSLFIEDLSEVDNLSKERYESVPRAYIVADEDLAIPVEFQEWMIQNAGIDVVNVMNGADHMAMLSKPQELCLSLLDIVNKYVI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03210 264 Pfam Alpha/beta hydrolase family 14 251 IPR000073 -
Vivi2g03210 264 Gene3D alpha/beta hydrolase 5 263 IPR029058 -
Vivi2g03210 264 PANTHER METHYLESTERASE FAMILY MEMBER 9 259 IPR045889 -
Vivi2g03210 264 FunFam (S)-hydroxynitrile lyase 9 263 - -
Vivi2g03210 264 SUPERFAMILY alpha/beta-Hydrolases 12 261 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03210 Vivi-Chr2 133622846 133624098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03210 9 170 Miscellaneous Gene Families AT5G10300 46.386 5.93e-45 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03210 - - tpra:123904154 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03210 2 133622846 133624098 Vivi1g02937 1 64128917 64135595 PCT
Vivi1g02938 1 64144674 64147375 Vivi2g03210 2 133622846 133624098 PCT