Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03088 TTCACCACCGCGCTCTCTCTATATAGAGACACCTTTTCTAAGTGCAAAACCATTCTACTTCATTCCAACTTCTCTATCAGTCTTTTGATAATGGAAACTCGAAAAACTCTCTCACCTTCCTTGTTGATTCTCTTCCTTATTATCATTTCCTTGTGTCACTCAAATGCACTATCAAGTGAGGAACACAGTGCTGTGAAGGCTCATAGAGGACCTGTAGTGCAGAGGGATCAAAGGAAGATACTGTTTGACAATGAAGATGGAGAAATCTCTGCCACTAATGTCAAAGATGGACAAAACACACCACATTACCATCTTCAGTTCTTTACATTGGAACCTAACTCTGTGTTCCTTCCTGTGCTTCTACATGCAGCTATGGTCTTTTATGTTCATACAGGGAATGGAAAGCTGACATGGTCAAATGAAGATGGTACTGGTACAATGGATATACGTGAAGGAGATGTAGGTAGTCTTGGAGAAGGATCTGTTTTCTATATACACAGCAACTTGGAATCACATAGGAAGAAACTGAGGATATATGCAATGTTTACTAATACTGATGAAAGCACTTTTGATCCATCTATTGGTGCTTACTCAAGGATCAATGAACTAGTCAAAGGCTTTGATAAGAATATCATCCAAGCAGCTTTTAAGGTGCCGGAAGATTTGGCTGAGGCAATCACAGACAACAGAGAGTCACTAGCAATAGTGCATGCAGTTCCAGTGAAGAAGCATAACAATGTCTTGGAATTGGATAATTTATTTGTAAAATACTTAAGAGGCATCCAATCCAACTCCAAGGAGCTCAAAACATACAACATCTTAGATAATGATCCTGACTTCAGAGATGATCATGGTTGGACCTCAACAGTGACCAAAAAGCAAGTCAAAGAATTAAAGCATCACAACATTGGATTTTTCATGGTGCATTTGAACCCGGGATCAATGTTGGGGCCACATTGGAATCCATTGGCAACAGAAATAGCAATGGTGTTGGAAGGGGAAGGTATGGTAAGAGTAGTATGTGGAAGCAACAATGATCATGAATGTGAGAACAAGAGGTTTAGAGTTAAGCAAGGAGATGTTTTTGTTGTGCCTAGGTTTCATGTAATGGCTCAAATGTCATTTGATAAAGGGCCACTTGTTTTTATGGGATTCAGCACTGCTGCAAAGAGAAATCATCCTCAGTTTTTGGCTGGTAAAGGATCCGTGCTTGAAAGTCTAGACAAACGGATAGTTGCTACATCTTTAGGTGTAAGCAAAGCAGCCATTGACAAGCTTTTGGATGATCCGGTTGATTCGATCATTTTCGGGTGTAGTTCTTGCGCAGAGGAAGAGGAGAGGTTAATGGAGGTAGAAAAGGAGAAGGAAAGAGAGGAGGAAGAGAAGAGGAGGGAAGAGGAAAAGAGGAGAGAAAAAGAGGAGAGGGAAAGAAGAAGAGAAAAGGAGGAAGAAGAAAGGAGAGAGGAGGAAGAAAGGAAAATTGAGGAAGAAGAAGCTAGAAGACAACAAGAAGAGAGGGAAAGGAGGAAAGAAGAGAAGGAAGCAAAGAGGGAGGAAGAGGCAAGGAGGGAGCAAGAAGAGAGGGAAAGGAGGAAAGAAGAGAAGGAAGCAAAGAGGGAGGAAGAGGCAAGGAGGGAGAAAGAAGAAGTTAGAAGAGAGAAAGAAAAGGCTAGAAAACAAGAGCAGGAGGAAAGGAAGAGAGAAGAGGAAGCTGAGAGAGAGAGGGAAGAGGCAGAGAGGGAGCAAGAAGCAGCAAGGAAACAAGAGCAGGAGGAGAAGAGGAGAGAAGAGGAAGCCGCGAGAGAAAGGGAAGAGGCAGAGAGGGAAAAAGAAGCAGCAAGAAAACAAAAGAAGGAGGAGAAGAAGAGAGAAGAGGAAGCTGCTAGAGAAAGGGAAGAGGCAGAGAGGGAACAAGAAGCAGCTAGGAGACAAAAGGAGAAGGAGAAGAAGAGAGAAGAGGAAGCTGCTAGAGAAAGGGAAGAGGCAGAGAGGGAACAAGAAGCAGCTAGGAGACAAAAGGAGAAGGAGAAGAAGAGAGAAGAGGAAGCCATGAGAGAAAGGGAAGAAGCAGAGAGGGAGCAAGAAGCAGCTAGAAAACAAAAGAAGGAAGAGAGGGAAAGAGAAAAGGAAGCAGAAGCAGAAGCTAGAGAAAAAGCTAGAGAACAGAAAGAAAAGAGAGAAGCGGCTAAAAGAGAACAGGAGAAGAGGGAAAGGAAAGAGGAGGAAGAAATGGAAATAGAAAGGGAAAAGGAAAGGAAGAGAGAAGAGGAGGAGAGAGAGGAGGAAGAAGCTAGAAGAGAACAAGAGAAGAGGGAAAGGGAAAGAGAAGAGAAGGAAACTAGGAGAAAGGAAGTGAGGAGAAAAAAAGAGACAACAGAATGGGAATGGGGAGATGAAGAAGAAGCAGCCAGAAGGCAGCAAGAAGAAAGGGAGAAGAAAAGAGAGCAAAAGAGTGGGAGTAGCTTTGAAGGAAGAAGAATTCTGAAGATTAGTAAGAGTGTGTGA 2505 0.4283 FTTALSLYRDTFSKCKTILLHSNFSISLLIMETRKTLSPSLLILFLIIISLCHSNALSSEEHSAVKAHRGPVVQRDQRKILFDNEDGEISATNVKDGQNTPHYHLQFFTLEPNSVFLPVLLHAAMVFYVHTGNGKLTWSNEDGTGTMDIREGDVGSLGEGSVFYIHSNLESHRKKLRIYAMFTNTDESTFDPSIGAYSRINELVKGFDKNIIQAAFKVPEDLAEAITDNRESLAIVHAVPVKKHNNVLELDNLFVKYLRGIQSNSKELKTYNILDNDPDFRDDHGWTSTVTKKQVKELKHHNIGFFMVHLNPGSMLGPHWNPLATEIAMVLEGEGMVRVVCGSNNDHECENKRFRVKQGDVFVVPRFHVMAQMSFDKGPLVFMGFSTAAKRNHPQFLAGKGSVLESLDKRIVATSLGVSKAAIDKLLDDPVDSIIFGCSSCAEEEERLMEVEKEKEREEEEKRREEEKRREKEERERRREKEEEERREEEERKIEEEEARRQQEERERRKEEKEAKREEEARREQEERERRKEEKEAKREEEARREKEEVRREKEKARKQEQEERKREEEAEREREEAEREQEAARKQEQEEKRREEEAAREREEAEREKEAARKQKKEEKKREEEAAREREEAEREQEAARRQKEKEKKREEEAAREREEAEREQEAARRQKEKEKKREEEAMREREEAEREQEAARKQKKEEREREKEAEAEAREKAREQKEKREAAKREQEKRERKEEEEMEIEREKERKREEEEREEEEARREQEKREREREEKETRRKEVRRKKETTEWEWGDEEEAARRQQEEREKKREQKSGSSFEGRRILKISKSV 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03088 834 Pfam Cupin 78 218 IPR006045 -
Vivi2g03088 834 Pfam Cupin 271 421 IPR006045 -
Vivi2g03088 834 Gene3D Jelly Rolls 261 437 IPR014710 -
Vivi2g03088 834 SMART Cupin_1_3 271 424 IPR006045 -
Vivi2g03088 834 CDD cupin_7S_vicilin-like_N 81 240 - -
Vivi2g03088 834 MobiDBLite consensus disorder prediction 447 834 - -
Vivi2g03088 834 CDD cupin_7S_vicilin-like_C 278 433 - -
Vivi2g03088 834 Gene3D Jelly Rolls 66 245 IPR014710 -
Vivi2g03088 834 Coils Coil 441 795 - -
Vivi2g03088 834 MobiDBLite consensus disorder prediction 447 822 - -
Vivi2g03088 834 SUPERFAMILY RmlC-like cupins 35 427 IPR011051 -
Vivi2g03088 834 PANTHER OS03G0336100 PROTEIN-RELATED 41 441 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03088 72 464 Miscellaneous Gene Families AT4G36700 41.446 6.62e-99 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03088 - - tpra:123911070 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03088 2 130828623 130831727 Vivi2g03088 2 130828623 130831727 ECH