Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03076 ATGAAGTGTCCGTACTGTTCAGCGGCGCAGGGTCGCTGCGCCACCACAACCACCGGAAAATCTATCACCGAATGCACCTCTTGCGGCCGCGTCGTAGAAGAACGCCAATCCCATCCCCACCACATATTCCACCTCCGCGCCCAAGACAACCCTCTCTGTCTCGTCACATCAGATCTCCCTCCTCCCACACTCCATCAAACCAACCAACAACAACAACCATACACCACCAACGACGAAGAAGAAGAGGACCCGTTCGAGCCCACGGGCTTCATAACGGCATTCTCCACGTGGTCCTTAGAGCCCAGCCCGCTTTACCTTCAATCCTCTCTCTCGTTCTCCGGCTACCTTGCCGAACTCGAACGGACGCTTGAGTCTTCTGCTTCTGCTTCATCGTCTAGTGTTGTTGTGGATAACCTTAGGGCTTATATGCAGATTATCGATGTTTCTTCGATACTTGGATTGGATTGTGATATTTGTGATCATGCGTTTCAGTTGTTTAGGGATTGTTGTTCTGCTACTTGTTTGAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCGGCTCTTGTTCAGGCCATTAGAGAAGCTCAAGAACCTAGAACCCTTCAGGAAATTTCGATTGCAGCTAATGTGGCACAAAAGGAAATTGGAAAATACATCAAGATACTGGGAGAAGCTTTACAGCTAAGTCAACCTATTAACAGTAATTCTATATCAGTTCATATGCCAAGATTTTGCACTCTTCTTCAGCTCAATAAATCTGCTCAGGAACTAGCTACTCATATTGGAGACGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCAATTAGCATCTCAGCTGCCGCCATATATTTGGCCTGCCAACTAGAAGACAAACGAAAAACTCAGGCCGAAATTTGCAAAGTAACTGGTCTTACTGAAGTCACTCTCCGTAAAGTGTACAAAGAATTACTGGAGAATTGGGATGATTTACTTCCCTCTAATTATACCCCAGCTGTTCCTCCTGAGCGGGCCTTTCCCACGACGTTAATTGCTTCTGGACGTTCTTCAACAACTAAGATTGATGCTATAGAGGTTACTTCTTTGGACTCAGAAAATTTGCCGGAATTTAAACCAAGCAAACCTAATGAGGTCTCGGTCATGGTCCATCAGTCAAGAGGAAAGGATGAGGCCGATGGTAAAAGTAATGCTCGCGTAAGCAATTCCACAGCTATTCAACAGTCAACCTTTTGGCAATCCCAACTTCCTAGTGCAACACACAATCATCAAAATCAAAATATTTTAGAATCAATGGATATTGATGCGTTGCAACGAAACCACCAACAACCTGAACCCATGGTAGAGGTCACAAATGGTGCTGCCATTGCTAGTTCGCTAAACTCAAACCAACTTTACAGTCCTCCTGCTTCAAGTTCAAGCTCTATTATGAGGTCGTTTTCGGCTCCTCCTTCATCTGCTCCTCCAAATATTCGACTAATGCAATCCTCCAAGACAATGCCAAGTTTTCCAGAGTACTGA 1521 0.455 MKCPYCSAAQGRCATTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTSDLPPPTLHQTNQQQQPYTTNDEEEEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGYLAELERTLESSASASSSSVVVDNLRAYMQIIDVSSILGLDCDICDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVAQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGDVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSSTTKIDAIEVTSLDSENLPEFKPSKPNEVSVMVHQSRGKDEADGKSNARVSNSTAIQQSTFWQSQLPSATHNHQNQNILESMDIDALQRNHQQPEPMVEVTNGAAIASSLNSNQLYSPPASSSSSIMRSFSAPPSSAPPNIRLMQSSKTMPSFPEY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03076 506 MobiDBLite consensus disorder prediction 57 83 - -
Vivi2g03076 506 CDD CYCLIN_SF 140 221 - -
Vivi2g03076 506 Gene3D - 239 335 - -
Vivi2g03076 506 MobiDBLite consensus disorder prediction 60 75 - -
Vivi2g03076 506 SMART cyclin_7 143 224 IPR013763 -
Vivi2g03076 506 SMART cyclin_7 239 320 IPR013763 -
Vivi2g03076 506 SUPERFAMILY Cyclin-like 140 230 IPR036915 -
Vivi2g03076 506 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 359 IPR000812 GO:0006352|GO:0070897
Vivi2g03076 506 Pfam Transcription factor TFIIB repeat 239 320 IPR013150 GO:0017025
Vivi2g03076 506 Pfam Transcription factor TFIIB repeat 141 222 IPR013150 GO:0017025
Vivi2g03076 506 MobiDBLite consensus disorder prediction 462 506 - -
Vivi2g03076 506 CDD CYCLIN_TFIIB_archaea_like_rpt2 236 322 - -
Vivi2g03076 506 PRINTS Transcription initiation factor IIB signature 185 204 IPR000812 GO:0006352|GO:0070897
Vivi2g03076 506 PRINTS Transcription initiation factor IIB signature 211 226 IPR000812 GO:0006352|GO:0070897
Vivi2g03076 506 PRINTS Transcription initiation factor IIB signature 274 290 IPR000812 GO:0006352|GO:0070897
Vivi2g03076 506 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Vivi2g03076 506 PRINTS Transcription initiation factor IIB signature 240 258 IPR000812 GO:0006352|GO:0070897
Vivi2g03076 506 PRINTS Transcription initiation factor IIB signature 306 320 IPR000812 GO:0006352|GO:0070897
Vivi2g03076 506 FunFam Transcription initiation factor IIB 239 336 - -
Vivi2g03076 506 SUPERFAMILY Cyclin-like 237 335 IPR036915 -
Vivi2g03076 506 Gene3D - 139 230 - -
Vivi2g03076 506 FunFam Transcription initiation factor TFIIB 139 230 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03076 K03124 - gmx:102662353 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03076 2 130709275 130712783 Vivi2g03076 2 130709275 130712783 ECH