Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03055 ATGGATTCAATGGATTTTAAGCTGAGTGAACTACTGAAAGAAGTTCAAGTAGATTACTCTCCCCAGTTCTCTAAACTCGTAGACGACACCGTCTCTTCCATCAAATCTTCCATCGACAAAATCCCTGAAAACTATAAGGTTAATGCTGATTTGGCACCGAATTTTGTTAGGGACATCGGTGCTGATAAGGTGGAGTTCAAATTTAAGAAGCCTTCGGTTTTTAAGCTTGGTGGTAGTTACTCCATACGAAGTCTCGCAAGGCCTGAATTAAATGTGGACCTTATTATAAGGTTACCGAAGGAGTGCTTCCATGAGAAGGATTATTTGAACTATAGATACCATGCCAAGAGGTGTCTTTATCTCTGCTTGCTGAAAAAGTATTTGGAGAAATCTCCATCTATTGGTAGGGTTGAATGGTCTACCATGCAGAACGAAGCTCGAAAGCCTTTACTGATTGTGTATCCGGCTGCAAAGCTTGTTGATGTTGATGGTTTTTCTGTGAGAATTATTCCATCGGCCATGTCTATCTTTAGCATACCGAAGTTAAACATGACACGTAATAACATTCATAATTCGAACAATGGGAGTTCTGTTCAAGCAACACCGAAGTATAATTCTAGTATCTTGGAAGACGTGTTTATAGAGGATACAGAATTAATGAACAAACTTTTTCTTGGATGGAAGGAACTAAGAGCAGCTTTAATCCTACTGAAGGTATGGGCTCGACAGAGAAGTTCAATATATGCTCATGATTGCCTGAATGGATTTTTGATATCCATCATACTTGCACATCTTGCTTCTAGGGAACAAATTAAGAATTCAATGAAGGTCATTGAAATAATTCGCATTACTTTGAACTTCCTTGCCACTTCGGAGACTTGGAGCCGAGGTGTCTACTTTCCAAAGGAAGGCCAGGGAAATATTACTAAAGAGGAAAGAATGCAACTAAAAGGGTCATTTCCAATTGTGATATGTCATCCATCAGGGGCATTCAATTTGGCTTTTCGAATGTCTAGGATTGGTTTTACCCAGCTTCAAGACGAGGCTGCTACGACACTTAAATGCATGGAAAAGTGTAGAGGTGGTGGATTTGAGGAAGTTTTTATGACCAAGATTGACTATGCTGTTAAATATGATTATTGTATGAGAATAAACTTTAAAGGAAACAAAGAGCTATATGCGTCAGGAATTTGTTTGGATGATGAATGCTGGAGATTGTATGAGGAGAAAATACATGCTATATTAGCTAAAGGATTGGGTGATAGAGCAAAATTCATTCGAGTTATATGGAGAAATGCAGAATGTCAATGGCGCGTGGATGATGGCTTGTCAATACTTGATAAAGAGCCCTTGTTCATAGGAATTTCAGTCAGTAATTTGGAGAAAGCATATAGGATGGTTGATATTGGTCCAAATGCTGAGAGTAAAGAAGAGGCTCTTGCGTTTCGAAAGTTTTGGGGAGATAAAGCAGAGCTTAGAAGATTTAAAGACAGTAGAATTGCAGAAAGCACAGTATGGGAATGTCAGAAATGGGAAAGGCATCTGATTTTGAAAAATATAGCTGAGCACGTCCTTAGTCTGCATCTATCTCTTCCCAAGGACAATATTATAGTAGTTGTGGATCAACTCGATTTTTCTTTGGCTCATGGTGCTGCAGACCCTATATCATACTCTGGAAGTTTGCTCGAGGCATTTGATGTTCTATCAAAACGCTTGCGTCTTATTGAAAACCTCCCTTTGAAGGTGTCTAGTGTACAACCTTTAGACTCCGCATTCAGGTTTACATCAGTCTTCCCTCCCGAACCTCACCTACTAGCTAATGAAAAGATTGAATCTTTCAGACTGAATAAGTTTGTTCCATCATGCATTCAACCACTAGAAATAATGGTTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAACTGCAATTGAAAAAATAAAATCTAGTTTCCTTATTCAAATTGGAGAAAGTCTTCAAAAGAAGTGGGGGATGACATGCACTGCAACTCAGGATGATGTGGACATATTAATGTCAGGATATGCATTTCGTCTTAAACTTTTGCATGAAAGGGCCCTTAGTTTGCTCAAAGAAATTGGGAATGATAAAAAAACACGGGTACATTCTGCAGACAAGACGCTTTTGATTCGTAGTCAACATGCTAGCATGATAAATGGACTACAAAGTCTTTACCCAATTTATGGACCAGTAGTTAGACTAGCAAAACGTTGGGCTGCTTCACATCTATTTTCTGCTTGTTTGGTAGAGGAGGCCATTGAGCTATTGGTTGCATATCTCTTTCTCAATCCTTTGCCGTTTGAAGCTCCATGCTCACGGATCACTGGATTTTTAAGATTCCTGCAGTTGCTCTCAGACTATGATTGGACTTTTTCTCCCTTGGTTGTTGACATAAATAATGACTTGAGCCAAAGTGATGTAAAAGAAATAAATGATAACTTTTTGCTACAAAAAAAAGGCCAGGGAGAGAATGGGCAAAATGTAGGGCCGGTGATGTTCTTGGCAACAGTTTACGATAAAGCATCTGAGGCCTGGACTGGATTATCACCTAATGCACTGGAACTTAAAAGGTTAGCTGCATATGCCCGAAGCAGTGCAAATTTGCTAAGGAAACTCACATTTCAGGAGGAGATTGGTCCAAATAGATGGGAGTGCCTTTTACGGACTCCTTTAAACAATTACGATGCAATCATTATTCTCCACAAGGACAAACTTGCGTATCCTCAAAGGCTTCTCTTCTCATCAGAAGTTGGTCACGGAACCCAAGTTGCTAAAGGACATGCTAGCAAATTCTTCCAACCCTTTTTGTTGCCTAGAGATTTGAAGGGTAGGCCAGAGGAACTTAAAAAGAAGTTGCTGGTTGACTTCGATCCATCAAGGTGCTTTATCAAAGATTTAGAGAAAGAGTTTTCCTCCACATTCAAGTTATGGCATGATTCTCTAGGAGGTGATGCCATCGGTCTAACATGGGCGAAATCGTGTCCTTCCAAGAAGCGGAAACAAGATGAAGTGGTTAAGGAAGGATATGACCCTAGGAAGGTGCTAAAAGCTGTAGGTGAAGTTGGAAAAGGGTTTGTGAGGAGTATATACTTTATCAAGCCACCAAGGATTGCTAACTAA 3141 0.3986 MDSMDFKLSELLKEVQVDYSPQFSKLVDDTVSSIKSSIDKIPENYKVNADLAPNFVRDIGADKVEFKFKKPSVFKLGGSYSIRSLARPELNVDLIIRLPKECFHEKDYLNYRYHAKRCLYLCLLKKYLEKSPSIGRVEWSTMQNEARKPLLIVYPAAKLVDVDGFSVRIIPSAMSIFSIPKLNMTRNNIHNSNNGSSVQATPKYNSSILEDVFIEDTELMNKLFLGWKELRAALILLKVWARQRSSIYAHDCLNGFLISIILAHLASREQIKNSMKVIEIIRITLNFLATSETWSRGVYFPKEGQGNITKEERMQLKGSFPIVICHPSGAFNLAFRMSRIGFTQLQDEAATTLKCMEKCRGGGFEEVFMTKIDYAVKYDYCMRINFKGNKELYASGICLDDECWRLYEEKIHAILAKGLGDRAKFIRVIWRNAECQWRVDDGLSILDKEPLFIGISVSNLEKAYRMVDIGPNAESKEEALAFRKFWGDKAELRRFKDSRIAESTVWECQKWERHLILKNIAEHVLSLHLSLPKDNIIVVVDQLDFSLAHGAADPISYSGSLLEAFDVLSKRLRLIENLPLKVSSVQPLDSAFRFTSVFPPEPHLLANEKIESFRLNKFVPSCIQPLEIMVQLEGSGNWPMDETAIEKIKSSFLIQIGESLQKKWGMTCTATQDDVDILMSGYAFRLKLLHERALSLLKEIGNDKKTRVHSADKTLLIRSQHASMINGLQSLYPIYGPVVRLAKRWAASHLFSACLVEEAIELLVAYLFLNPLPFEAPCSRITGFLRFLQLLSDYDWTFSPLVVDINNDLSQSDVKEINDNFLLQKKGQGENGQNVGPVMFLATVYDKASEAWTGLSPNALELKRLAAYARSSANLLRKLTFQEEIGPNRWECLLRTPLNNYDAIIILHKDKLAYPQRLLFSSEVGHGTQVAKGHASKFFQPFLLPRDLKGRPEELKKKLLVDFDPSRCFIKDLEKEFSSTFKLWHDSLGGDAIGLTWAKSCPSKKRKQDEVVKEGYDPRKVLKAVGEVGKGFVRSIYFIKPPRIAN 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03055 1046 Pfam Nrap protein domain 3 375 529 IPR035368 -
Vivi2g03055 1046 Pfam Nrap protein PAP/OAS-like domain 230 371 IPR035367 -
Vivi2g03055 1046 Pfam Nrap protein PAP/OAS1-like domain 5 732 883 IPR035370 -
Vivi2g03055 1046 Gene3D - 205 374 - -
Vivi2g03055 1046 Pfam Nrap protein domain 6 898 1036 IPR035371 -
Vivi2g03055 1046 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 2 1037 IPR005554 -
Vivi2g03055 1046 Pfam Nrap protein domain 1 92 216 IPR035082 -
Vivi2g03055 1046 Pfam Nrap protein nucleotidyltransferase domain 4 558 729 IPR035369 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03055 K14544 - gmx:100776157 1716.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03055 2 130173820 130181544 Vivi2g03055 2 130173820 130181544 ECH