Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03038 ATGTCCGCCGCTAAATTAACCTCATGCGTCGCCGCAACAGCGGCCGCAGTGGCTTCAATCTCCACTCGCTCCGATCCTGCTTACTCCGAATCTTTCTTCCGATTTCCTTTTTTCTCTTCCTCACCTTCCAATTCACCTTCACCGACGAACCAATCATCTGACACCAAGTCAGAATCTCCACCGTCCGAGGAACCTAACAAGTCGGGTTTTGATCCTGAATCGTTAGAAAGAGCTGCCAAAGCTCTCCGTGAAATCAATAGTTCACCCTACTCTAAACAGGTGTTTGATTTAATGCGTTCACAGGAAACAACTCGACTTGCTGAGCTAGATGCTGAGAAAGTTTATTATGAACTTATTCAGTCTCAAGGAGATATTGACAGGCTGCGTAAAATGGCTGAAGAACAACGCAATCTAATACAAGAGCAGAATCAGAGGCAGGCTCAGGTGTTGCGATTTGAAGATGAATTGGCAAGGAAAAGAATGCAGACAGATCATGAAAACCAACGGCAACATAATGTTGAGTTGGTCAAGATGCAAGAGGATTCTTCTGTAAGAAAGGAGCAAGCAAGACAGGCTACTGAAGAACAGATTCAATCTCAGAAGCGTCAGACCGAGAAAGAGCGAGCTGAAATAGAAAGAGAAACCATTAGAGTTAAGAAAATGGCAGAGGCTGAAGCTCGAGCCCATGAAGCAAAATTAACTGAGGATCATAACAGGAGAATGCTTATAGATCGAATGCATGGGGAAAGAGATAAATGGCTTGCTGCAATTAACACTACCTTTAGTCATATTGAAGGTGGTCTAAGGGTCTTATTGACCGATAGGGACAAACTGATTATGACTGTTGGAGGAGCAACTGCATTAGCTGCAGGAGTATATACAACAAGAGAAGGTGCAAAAGTTACATGGGGCTATATTAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAGTCATCTATGGCAAAGTTTCCAGGATCAAGGATCATGTCTCAAGCCAAAAATAAAGTTTTAAATTACAGTACCTTGGCCAGGGCAGAGAAGCCTGTTGGGAGTCAAAATGGTCTTGGAAATGTAATCTTGCATCCATCATTGCAGAGAAGAATAGTACATCTAGCACGGGCAACATCAAATACCAAGGCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGTCCTCCTGGGACTGGTAAAACCATGGTTGCAAGAGAAATAGCTAGAAAATCGGGCTTGGATTATGCAATGATGACCGGAGGAGATGTTGCACCTCTGGGCCCACAAGCTGTTACCAAAATTCATGAGATATTTGATTGGGCCAAGAAATCTAAAAGAGGCCTATTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCTCATATATGAGTGAAGCTCAACGAAGTGCCCTAAATGCGTTGCTTTTCAGAACTGGCGATCAGTCTAGAGACATAGTACTTGTCCTTGCCACAAACAGACCAGGAGATCTTGATAGTGCAATTACTGATCGCATTGATGAAGTAATTGAATTTCCGCTTCCAGGAGAGGAGGAACGATTTAAGTTATTGCAGCTCTATTTGAACAAGTATCTATGTGATGACAGTAACGACTCCAAGGGGGGCTTGTTTTTGAAGAAGCAGCCTCAGAAGATAACCATAAAAGATTTATCTGAAGATGTGCTGAAAGAGGCTGCAAAGAAAACAGAAGGATTTTCTGGCCGTGAGATAGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTCTATGGACGCCCTGACTGCGCCTTGGATTCTCAGCTCTTTAAAGAACTTGTAGATTATAAGGTTGTTGAACATCATCAGCGATTAAAACTAGCAGCTGAAGGCGGCCTCCCTGCGTGA 1887 0.4377 MSAAKLTSCVAATAAAVASISTRSDPAYSESFFRFPFFSSSPSNSPSPTNQSSDTKSESPPSEEPNKSGFDPESLERAAKALREINSSPYSKQVFDLMRSQETTRLAELDAEKVYYELIQSQGDIDRLRKMAEEQRNLIQEQNQRQAQVLRFEDELARKRMQTDHENQRQHNVELVKMQEDSSVRKEQARQATEEQIQSQKRQTEKERAEIERETIRVKKMAEAEARAHEAKLTEDHNRRMLIDRMHGERDKWLAAINTTFSHIEGGLRVLLTDRDKLIMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIMSQAKNKVLNYSTLARAEKPVGSQNGLGNVILHPSLQRRIVHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSKRGLLLFIDEADAFLCERNSSYMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPGEEERFKLLQLYLNKYLCDDSNDSKGGLFLKKQPQKITIKDLSEDVLKEAAKKTEGFSGREIAKLMASVQAAVYGRPDCALDSQLFKELVDYKVVEHHQRLKLAAEGGLPA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03038 628 Coils Coil 125 145 - -
Vivi2g03038 628 SMART AAA_5 385 518 IPR003593 GO:0016887
Vivi2g03038 628 Pfam ATPase family AAA domain-containing protein 3, N-terminal 52 317 IPR021911 -
Vivi2g03038 628 MobiDBLite consensus disorder prediction 38 64 - -
Vivi2g03038 628 FunFam ATPase family AAA domain-containing protein 3 343 533 - -
Vivi2g03038 628 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Vivi2g03038 628 MobiDBLite consensus disorder prediction 161 192 - -
Vivi2g03038 628 PANTHER PUTATIVE ATP-ASE 20 623 - -
Vivi2g03038 628 MobiDBLite consensus disorder prediction 161 210 - -
Vivi2g03038 628 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Vivi2g03038 628 Gene3D - 335 533 IPR027417 -
Vivi2g03038 628 Coils Coil 183 217 - -
Vivi2g03038 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 611 IPR027417 -
Vivi2g03038 628 MobiDBLite consensus disorder prediction 38 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03038 Vivi-Chr2 129735192 129742568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03038 387 592 Miscellaneous Gene Families AT5G53170 31.308 6.82e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03038 K17681 - gmx:100777755 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03038 2 129735192 129742568 Vivi2g03038 2 129735192 129742568 ECH