Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03012 ATGGCCTCAGAAAACAAAATCCTGATCCTTGGACCAACAGGAGCTATTGGAAGACACATAGTTTGGGCAAGTATTAAAGCTGGAAATCCAACATATGCTTTGGTTAGGAAAACATCTGTCAATGTTAACAAACCAAAACTACTCACAGCTGCTAATCCTGAAACCAAGGAAGAGCTTCTTCAAAATTTTCATGCTTCTGGAGTTATTCTACTTGAAGGTGATATAAATGATCATGAAACTCTTGTTAACGCAATCAAGCAAGTTGATACTGTGATATGTGCTGCTGGTAGACAACAAATTGAAGATCAAGTTAAGATTATTAAAGCAATTAAAGAAGCCGGAAACGTAAAGAGATTCTTCCCATCTGAGTTTGGACTAGATGTGGATCGTCAGCATGCGGTTGAGCCCGTGAGACAAGTTTTTGAAGAAAAAGCGAGTATAAGAAGAGTAATCGAATCTGAAGGAGTTCCTTACACTTATCTTTGTTGTCATGCCTTTACCGGTTACTTCTTACGTAACTTGGCTCAACTCGACGCCATTATTCCTCCTCGCGATAAAGTTGTCATTCTAGGAGACGGAAACGTGAAAGGAGCATATGTGACTGAGGCTGATGTTGGGACATATACCATCAGAGCAGCAAATGATCCCAACACATTGAACAAAGCTGTCCACATAAGACTCCCTAACAATTATTTGACAACAAATGAGGTCATTGCTCTATGGGAGAAAAAAATCGGAAAAACTCTTGAGAAAACATATGTTTCAGAGGAGCAAGTTCTTAAAGACATTCAAGAATCTCCATTCCCTAATAACTATTTTTTGGCATTGAACCATTCACAACAAATAAAGGGAGATGCAGTGTATGAGATTGACCCTGCCAAAGATATTGAAGCTTATGATGCTTATCCTGATGTGAAATACACTACTGCTGATGAATATTTGAACCAATTTGTCTGA 957 0.3856 MASENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTSVNVNKPKLLTAANPETKEELLQNFHASGVILLEGDINDHETLVNAIKQVDTVICAAGRQQIEDQVKIIKAIKEAGNVKRFFPSEFGLDVDRQHAVEPVRQVFEEKASIRRVIESEGVPYTYLCCHAFTGYFLRNLAQLDAIIPPRDKVVILGDGNVKGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTTNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESPFPNNYFLALNHSQQIKGDAVYEIDPAKDIEAYDAYPDVKYTTADEYLNQFV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03012 318 Pfam NmrA-like family 7 308 IPR008030 -
Vivi2g03012 318 Gene3D - 163 314 - -
Vivi2g03012 318 CDD PCBER_SDR_a 6 313 IPR045312 GO:0016491
Vivi2g03012 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 293 IPR036291 -
Vivi2g03012 318 Gene3D - 6 302 - -
Vivi2g03012 318 PANTHER PINORESINOL REDUCTASE-RELATED 4 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03012 Vivi-Chr2 129114222 129115897 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03012 K23050 K05281 gmx:100781863 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03012 2 129114222 129115897 Vivi2g03012 2 129114222 129115897 ECH