Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03002 ATGAAAAATTTTCCTTTCTTTTTCCTTTTGGCCATTTTGGTCCATCAAAACTGTTATTCCAATATCAATGTAGAAGCTGCTGGTGGTGGCGGTGGTAATGGTTTTGTCAGAACAAGAGGGATCCACTTCATGTTAAATGGAAATCCTTACTATGCAAATGGTTTCAATGCTTACTGGCTAATGTATACAGCTGCTGATCCATCTCAGAGATACAAAGTTTCAAATGCTTTCAATGAAGCAAAAACTCATGGCCTTACTGTTGCTAGAACTTGGGCTTTCAGTGATGGTGGTTATAGTCCTTTGCAATATTCTCCTGGTTTTTATAATGAACAAATGTTTAAGGGGTTAGATTTTGTTATATCTGAGGCTAGAAAGCATGGGATTAAGCTGATACTGAGTTTGGTGAACAACTATGAGAGTTTTGGAGGAAAGAAGCAGTATGTGAACTGGGCTAGAAGTAACAATGGACAGTATTTGACATCTGATGATGATTTCTTTAGGAACCCTGTTGTTAAAGGTTTCTACATCAACCATGTTAAGACTGTTCTTAACAGATACAACAGTTTTACCGGAATCCATTACAAAGATGACTCAACAATCATGGCATGGGAGCTTATGAATGAACCTAGGTGTACATCAGATCCTTCTGGAAGAACTATTCAGGCTTGGATCACAGAAATGGCTTCTTTGGTGAAGTCCATTGACAGGAATCACTTATTGGAAGCTGGTCTAGAAGGGTTTTATGGACAATCAACACCTCAAAGGACCAAATTGAATCCTTCTATTAACATAGGAACAGACTTCATTGCCAACAATAGAATCCCAAACATCGATTTTGCAACCGTTCACTGTTATCCCGATCAATGGGTACAGAGTTCAAACGAGCAAGATCAGATTGCATTTTTGAATAACTGGCTCAATGCTCATTTCCTAGATGCACAATATGCTCTGAAGAAGCCAATTCTAGTAGCAGAATTTGGAAAGTCATTTAAGGATTCAGGTTACAGCACAAACCAAAGGGACCAACTTTTCAATACCGTGCTCTACAAGATATATACGTCTGCGAAAAGAGGCGGTCCTGCGAGTGGAGCATTATTCTGGCAACTTCTTACAGGAGGAATGGAATCTTTTGACGACGGTTACGGAATAATGCTCGGTCAGAGTTCTTCTACTGCTAATGTCATTGCTCAACAATCTCATAAGCTTTACCTTATCCGGAAGATCTATTCGAGGATCGCTAATGAACGGCGGTGGAAAAGAGCTAGAGGAAATAGAGGAGGACAAATTGGGTTTTGA 1296 0.3958 MKNFPFFFLLAILVHQNCYSNINVEAAGGGGGNGFVRTRGIHFMLNGNPYYANGFNAYWLMYTAADPSQRYKVSNAFNEAKTHGLTVARTWAFSDGGYSPLQYSPGFYNEQMFKGLDFVISEARKHGIKLILSLVNNYESFGGKKQYVNWARSNNGQYLTSDDDFFRNPVVKGFYINHVKTVLNRYNSFTGIHYKDDSTIMAWELMNEPRCTSDPSGRTIQAWITEMASLVKSIDRNHLLEAGLEGFYGQSTPQRTKLNPSINIGTDFIANNRIPNIDFATVHCYPDQWVQSSNEQDQIAFLNNWLNAHFLDAQYALKKPILVAEFGKSFKDSGYSTNQRDQLFNTVLYKIYTSAKRGGPASGALFWQLLTGGMESFDDGYGIMLGQSSSTANVIAQQSHKLYLIRKIYSRIANERRWKRARGNRGGQIGF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03002 431 Gene3D Glycosidases 32 406 - -
Vivi2g03002 431 SUPERFAMILY (Trans)glycosidases 35 395 IPR017853 -
Vivi2g03002 431 PANTHER - 6 425 IPR045053 GO:0004553
Vivi2g03002 431 FunFam Mannan endo-1,4-beta-mannosidase 6 32 406 - -
Vivi2g03002 431 Pfam Cellulase (glycosyl hydrolase family 5) 53 346 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03002 Vivi-Chr2 129003028 129005940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03002 1 430 Glycoside Hydrolase AT5G66460 66.977 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03002 K19355 - qsa:O6P43_033679 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03002 2 129003028 129005940 Vivi2g03002 2 129003028 129005940 ECH