Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02972 ATGGCAGGTTCATCAGAAGAGGGACAAGTTATCAGCTGTCACAGCGTTGATGCATGGAACGATGTCCTTCACAGAGGCAATGAATCCAAGAAACTGATCGTTGTGGACTTTACTGCTTCTTGGTGTGGACCATGCCGTTTCATTTCACCATTCCTTGCTGAGCTAGCTAAGAAGTTCACAAATGTCATATTCCTTAAGGTGGATGTGGATGAATTAAAGTCTGTTGCTCAAGATTGGGCTGTTGAGGCTATGCCAACATTTGTGTTTGTGAAAGAAGGAACCATTTTGGGCAAAGTGGTTGGAGCAAAGAAAGAAGAACTCCAGCAGACAATTGAGAGACATGTGGCTTCATCCAATGCTTAA 363 0.4353 MAGSSEEGQVISCHSVDAWNDVLHRGNESKKLIVVDFTASWCGPCRFISPFLAELAKKFTNVIFLKVDVDELKSVAQDWAVEAMPTFVFVKEGTILGKVVGAKKEELQQTIERHVASSNA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02972 120 ProSiteProfiles Thioredoxin domain profile. 1 116 IPR013766 -
Vivi2g02972 120 Gene3D Glutaredoxin 2 119 - -
Vivi2g02972 120 PRINTS Thioredoxin family signature 41 50 - -
Vivi2g02972 120 PRINTS Thioredoxin family signature 80 91 - -
Vivi2g02972 120 PRINTS Thioredoxin family signature 33 41 - -
Vivi2g02972 120 PANTHER THIOREDOXIN 10 112 - -
Vivi2g02972 120 SUPERFAMILY Thioredoxin-like 7 117 IPR036249 -
Vivi2g02972 120 FunFam Thioredoxin 9 116 - -
Vivi2g02972 120 CDD TRX_family 28 112 - -
Vivi2g02972 120 Pfam Thioredoxin 15 112 IPR013766 -
Vivi2g02972 120 ProSitePatterns Thioredoxin family active site. 34 52 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02972 Vivi-Chr2 128373295 128375356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02972 K03671 - gmx:100499701 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02972 2 128373295 128375356 Vivi2g02972 2 128373295 128375356 ECH