Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02956 ATGGACCGTCGAGGTTGGCCGTGGAAGAAAAAATCATCTGATAAAGTCACAAAGACTGATAAACCGTTTGAGGCACATGACTCTGTTGATTCTACCTTGTCTTCTGTGGCACATTTAGGAAATCAGGAAAATTGCGCAAATAAGAATTATGTTCAAATTCCAATGGACTCATACACATGTATGACTGGATTGGAAGATCAAGTAAAAGATTTGGAATCAAAGCTATCAGCAGCTTATTCAGAGTTAGATAACAAGGAAAATCTGGTTAAACAGCATGCGAAAGTTGCGGAGGAAGCAGTCTCAGGTTGGGAGAAAGCTGATGCAGAAGTTGTTTCCTTAAGAAGTCAACTTGAATCTATCACTCTTTCGAAGCGTAGTTGTGATGAGAGAGTAACTCACTTAGACGGAGCTTTGAAAGAATGCGTGAAGCAGATAAGAACTATAAAGGAAGAAAATGAGAAGAAAATACAAGAGGTGATTCTTATGAAGTCTCAACAGTGGGAAAGGTTCAAGTTAGAGCTTGAATCGGAAATAGATAAGTTGGATAAAGGACTTCGCGAAGAAGCTTCTGAAAATGCCGCGCTTCTGAGATCGCTTCATGAGAGTTCAAACAAAATAGTGAAACTAAAAGAAGAAAAGTCTGAAGTTGAGGCCGAGTTAGAGCTTCAAAAGAAGAATGTTCAGTCATATGAGAAAGAAGTGAATTCTTTGAAGTATGAGCTGCATATTGTTTCTAAGGAGATGGATATTCGAAACGAAGAGAAGAACATGATAATGAAATCGGCAGAAGTGGCTAACAAACGGCACTCCGAGGATGTTAAGACTATTGCTAGGTTGGAGGGTGAGTGTCAACGTCTTCGTGGTCTGCTGCGAAAGAAGTTACCTGGACCTGCTGCATTGGCACAAATGAAGCTAGAAGTTGAGAGTACGCACCGCGTCATTAGTGGAATTCATCAAAGGAAAAGTAGTAACCAGCAAGAATCTGAGTTTCTTAGTGTGTTGAAACGATTTGAGGTGTTTGAAGAAGAAACAACGAGATTGAAAGAAGCTTTGGCCTCAAGTAATGCTGAACTACAGGCTTCTAGGAACTTGTACACTAAAACAGTTGGTAGAGTCAAGAGCTTAGAAGCTGAGGTACAAATTCTTCATCAAGAAAGAAGTTCGCAGACGCAGAAATCAAATTTAGAGCTCAATTACCGGAATTCTTCGAGTAGAATTTCTAGCAATTCACCAAGCATCACTTCTATATCTGATAGTTGGCATGAGGATCCAGAAAGTCCTGTTGAGTCATTTGCAGCCTCAGTTTCTGGCCATTTTGAAGTAAGTCGAGTTAGAAGCTCGGTTAAATATGAGAATCGCAAAAGTGAAGCTATCTCAGAACTGATGGACGATTTCCTCGAAATGGAGAAAATGGCATGTTCGTCAGACAATGACAGTGTACAGATTGCTAACAAAGTAAAGAACGATTCCGAAGATAATCAATTAAAATCAAATGACGCTTTGGTTGAGATTCAGCTGAAATGTATGACAGAGTCTTATAAGTCACTTCAAACACATGTAGAAGAGCTAGAAGCTGAAAATAAGCGTCTTAAGGAAAAGATAGATGAGCTAAAGAACGATCTCGAGGAGGAGAAACACTGTCATCATAATGCTTTGGCGAGGCACAAAGAATTAGAGGAAAAAATGCAAAGGGATAAGTGTCTGGAGTGTACGTCAAATTCGGCAGCAAAGAAAGACATTGATACTCGGAAGGACGCAGAACTAGCAGCTGCAGAGAAAAAGCTAGCACAATGTCAAGAGACGCTACATGTACTTGGCAGGCAGTTACAAGCAATGTGTCCACAAATTGGCTCTAAAAGACTTCAAACAAATGAATCGTCGATTATACCAAATTATGATTGGTCGAATTCCAATGGCTCCTATAACTCAGATGAAATTGATCATGCTGAAGCATGTAGTCTATCTTCTAATTCTGATATTCAAGGAGCGAATGACGAGTTTTCATCATCTCGGAACTTTAGTTCCACGTCATGTCTTTCAGACACAGAATGCAACCGTTCGGTAAACTCTTCAATAGTATCAGAGGGATCTCACCGATGA 2100 0.3995 MDRRGWPWKKKSSDKVTKTDKPFEAHDSVDSTLSSVAHLGNQENCANKNYVQIPMDSYTCMTGLEDQVKDLESKLSAAYSELDNKENLVKQHAKVAEEAVSGWEKADAEVVSLRSQLESITLSKRSCDERVTHLDGALKECVKQIRTIKEENEKKIQEVILMKSQQWERFKLELESEIDKLDKGLREEASENAALLRSLHESSNKIVKLKEEKSEVEAELELQKKNVQSYEKEVNSLKYELHIVSKEMDIRNEEKNMIMKSAEVANKRHSEDVKTIARLEGECQRLRGLLRKKLPGPAALAQMKLEVESTHRVISGIHQRKSSNQQESEFLSVLKRFEVFEEETTRLKEALASSNAELQASRNLYTKTVGRVKSLEAEVQILHQERSSQTQKSNLELNYRNSSSRISSNSPSITSISDSWHEDPESPVESFAASVSGHFEVSRVRSSVKYENRKSEAISELMDDFLEMEKMACSSDNDSVQIANKVKNDSEDNQLKSNDALVEIQLKCMTESYKSLQTHVEELEAENKRLKEKIDELKNDLEEEKHCHHNALARHKELEEKMQRDKCLECTSNSAAKKDIDTRKDAELAAAEKKLAQCQETLHVLGRQLQAMCPQIGSKRLQTNESSIIPNYDWSNSNGSYNSDEIDHAEACSLSSNSDIQGANDEFSSSRNFSSTSCLSDTECNRSVNSSIVSEGSHR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02956 699 SUPERFAMILY Tropomyosin 62 254 - -
Vivi2g02956 699 MobiDBLite consensus disorder prediction 1 26 - -
Vivi2g02956 699 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 490 691 - -
Vivi2g02956 699 Coils Coil 171 247 - -
Vivi2g02956 699 Coils Coil 588 608 - -
Vivi2g02956 699 MobiDBLite consensus disorder prediction 401 426 - -
Vivi2g02956 699 MobiDBLite consensus disorder prediction 401 421 - -
Vivi2g02956 699 Coils Coil 61 88 - -
Vivi2g02956 699 Coils Coil 138 158 - -
Vivi2g02956 699 Coils Coil 506 547 - -
Vivi2g02956 699 Pfam Filament-like plant protein, long coiled-coil 85 494 IPR008587 -
Vivi2g02956 699 Pfam Filament-like plant protein, long coiled-coil 494 615 IPR008587 -
Vivi2g02956 699 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02956 Vivi-Chr2 127888049 127891629 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02956 - - psat:127120157 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02956 2 127888049 127891629 Vivi2g02956 2 127888049 127891629 ECH