Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02898 ATGGCTGCTGCAGTAACAGCCGCAGTCTCCTTGCCATACTCCAACTCCACTTCTCTTCCGATCAGGACATCTATTGTTGCACCAGAGAGACTTGTCTTCAAAAAGGTTTCATTGAACAATGTTTCTATAAGTGGTAGGGTGGGTACCATCAGAGCTCAGGTTACTACTGAGGCACCTGTTAAGGTAGTAAAGCATTCAAAGAAACAAGATGAAGGTATTGTTGTGAACAAGTTCAAACCCAAGGAACCATACGTTGGGAGGGTTCTTCTCAACACAAAGATCACTGGTGATGATGCACCTGGTGAAACTTGGCACATGGTTTTCAGCACTGAGGGAGAGGTTCCTTACAGAGAAGGACAATCAATTGGGATAGTTCCAGATGGTATTGACAAGAATGGAAAGCCTCACAAGCTGAGATTGTATTCAATTGCTAGCAGTGCCATTGGTGATTTTGGAGACTCCAAAACTGTTTCTCTATGTGTGAAGCGTCTCGTGTACACAAACGATGCTGGAGAAGTTGTTAAGGGAGTTTGCTCAAATTTCTTGTGTGATTTGAGGCCCGGATCAGAAGTAAAGATTACTGGACCAGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACTGTCATCATGTTGGGAACTGGAACTGGAATCGCCCCATTTCGCTCATTTTTATGGAAAATGTTCTTTGAGAAGCACGAAGATTACCAGTTCAATGGTTTGGCATGGCTCTTCCTAGGTGTCCCCACAAGCAGCTCACTTCTTTATAAAGAGGAATTCGAAAAGATGAAGGAGAAAGCACCTGAGAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAACAAGTAAACGATAAAGGCGAGAAAATGTACATCCAAACCAGAATGGCTCAATATGCAGAAGAGTTATGGGAGTTACTGAAGAAAGACAACACTTTTGTTTACATGTGTGGACTGAAAGGAATGGAAAAGGGAATCGATGACATAATGGTGTCACTCGCTGCCAAAGACGGTATCGATTGGATCGAGTACAAGAGAACGTTGAAGAAGGCGGAGCAATGGAATGTTGAAGTGTATTAA 1083 0.4303 MAAAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSLNNVSISGRVGTIRAQVTTEAPVKVVKHSKKQDEGIVVNKFKPKEPYVGRVLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLRPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKRTLKKAEQWNVEVY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02898 360 FunFam Ferredoxin--NADP reductase, chloroplastic 65 197 - -
Vivi2g02898 360 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 206 360 IPR039261 -
Vivi2g02898 360 Gene3D - 198 360 IPR039261 -
Vivi2g02898 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 212 231 IPR001709 GO:0016491
Vivi2g02898 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 139 146 IPR001709 GO:0016491
Vivi2g02898 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 290 306 IPR001709 GO:0016491
Vivi2g02898 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 314 322 IPR001709 GO:0016491
Vivi2g02898 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 176 185 IPR001709 GO:0016491
Vivi2g02898 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 254 265 IPR001709 GO:0016491
Vivi2g02898 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 116 126 IPR001709 GO:0016491
Vivi2g02898 360 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 IPR001709 GO:0016491
Vivi2g02898 360 FunFam Ferredoxin--NADP reductase, chloroplastic 198 360 - -
Vivi2g02898 360 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 81 203 IPR017927 GO:0016491
Vivi2g02898 360 PANTHER - 3 360 IPR015701 GO:0016491
Vivi2g02898 360 PIRSF Frd-NADP+_RD 1 360 IPR015701 GO:0016491
Vivi2g02898 360 PIRSF FNR-PetH 4 360 IPR035442 GO:0016491
Vivi2g02898 360 Pfam Oxidoreductase NAD-binding domain 213 327 IPR001433 GO:0016491
Vivi2g02898 360 Gene3D Translation factors 51 197 - -
Vivi2g02898 360 CDD CYPOR_like_FNR 76 360 - -
Vivi2g02898 360 SUPERFAMILY Riboflavin synthase domain-like 60 204 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02898 Vivi-Chr2 126226756 126229686 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02898 K02641 - gmx:100798467 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02898 2 126226756 126229686 Vivi2g02898 2 126226756 126229686 ECH