Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02897 ATGGCTTCTTCTACTCAATTTACTATCACTTTTGTAGCCCTAATTCTTCTTCAATACATAATAGGTTCGTATTCAACAACATTCACAATAGTTAATAAGTGCAGTTACACAGTATGGCCAGGAATTTTATCCGGCGCCGGAACATCACCGTTCTCCACCACCGGTTTCGCTCTTCAACCCGGCGAGTCCAATGCTCTCCCCGTACCACCTTCCTGGTCCGGCCGTCTCTGGGGACGAACCCTCTGCTCCCAAGACTCCACCGGAAAATTCTCATGCATAACCGGCGATTGCGATTCCTCCACCATCGAATGTGCAGGAAAAAACGCTATCCCTCCCGCTTCCTTAGCGGAGTTCACTCTCAACGGCGCCGGAGGACTTGACTTCTTCGACGTCAGCCTCGTCGACGGTTACAATCTCCCTATACTAATCGAACCACACGGACAAACCGACGGAGGAAACTGCACCGCGACGGGTTGCTCCGTCGACCTAAACGCCGCGTGTCCAACAGAATTGAAAGTGATGAGTAGTGACGGCGGTGGAGAGAGCGTGGCATGTAAAAGCGCGTGTGAAGCTTTTGGGGATCCACAATATTGCTGCAGTGGCGCCTACGGTTCGCCAGATACATGTAAACCAAGTACCTACTCGCAGTTTTTCAAGAGCGCGTGTCCACGCGCTTATAGTTATGCTTATGACGATGGATCCAGCACTTTCACGTGTGCCTCGGCTGATTATACCATCACTTTTTGCCCAACACCTTCCACAGGTTCAATCAAATCTGGGAACGAGAAATATCCGATACCGGCGGCCGATGTGTCTGGTGTCCGACGCGTGGACGGGACAGCCAACAACTTAGTGACTATTGTTGTTGCCTTTGTTTTGATGGTCTTGGTGGTTGAACGGTTGTGGTAG 909 0.5083 MASSTQFTITFVALILLQYIIGSYSTTFTIVNKCSYTVWPGILSGAGTSPFSTTGFALQPGESNALPVPPSWSGRLWGRTLCSQDSTGKFSCITGDCDSSTIECAGKNAIPPASLAEFTLNGAGGLDFFDVSLVDGYNLPILIEPHGQTDGGNCTATGCSVDLNAACPTELKVMSSDGGGESVACKSACEAFGDPQYCCSGAYGSPDTCKPSTYSQFFKSACPRAYSYAYDDGSSTFTCASADYTITFCPTPSTGSIKSGNEKYPIPAADVSGVRRVDGTANNLVTIVVAFVLMVLVVERLW 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02897 302 PANTHER OS03G0233200 PROTEIN 15 250 IPR001938 -
Vivi2g02897 302 ProSiteProfiles Thaumatin family profile. 25 250 IPR001938 -
Vivi2g02897 302 PIRSF PR5 1 290 IPR001938 -
Vivi2g02897 302 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Vivi2g02897 302 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Vivi2g02897 302 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Vivi2g02897 302 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Vivi2g02897 302 SMART tha2 28 250 IPR001938 -
Vivi2g02897 302 FunFam THAUMATIN-LIKE PROTEIN 1 26 250 - -
Vivi2g02897 302 CDD TLP-PA 27 249 - -
Vivi2g02897 302 Gene3D Thaumatin 26 250 IPR037176 -
Vivi2g02897 302 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Vivi2g02897 302 Pfam Thaumatin family 32 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02897 Vivi-Chr2 126179703 126181498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02897 7 251 Receptor kinase-like Gene Family AT5G38280 51.012 2.36e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02897 - - gmx:100806478 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02897 2 126179703 126181498 Vivi2g02897 2 126179703 126181498 ECH