Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02799 ATGGCATCTGGTGAAGATGAAACTGGTGGAATGATGGAGATTCCCGCGGAAGATTCCTCTAGAACGGAGGAGCATTTGTCTGATTCTGATACGAATCATCAAAACAAGGATGGAAGTAATATAAATCTAGTAATGGAAAATGGCTTATCTGATGGCAATGAACGTCAGGCTGATACTTATGATCAGCTTCTACAAATGGTTGTTGACCTGAAATTTCAGAATGAATTTTTGAAGTCTCAGTTTGAGGGGTTTAGCAACGTTAACAGTGTAAGTAGTGACTCTAGTATACAGAAAGGAGCTGGTGGAGTGGAAGATGGGGAATCTGACATTGTGAAAGAGCTCCGGGAAAGGATAGAATCGTTGAATAAAGAATTTCTGGAAGAGAAACAAACGAGAATTGCATCCGAAGAAGCTTTGAAGCACCTTCAAATTTTGTATTCAGATGCAGAAGCTAAAGCCAAAGATCTCTCTGAACAGCTTGTAGAAGCTCAAAATAAGTCAGAACGTGAAATAAAAGATCGCGATGAGAAGTACTCTGAACTTGATGCTAAGTTAAATAGGCTTCACAAAAGGGCAAAACAACGCATTCAAGAGGTTCAAAAGGAAAAAGATGATCTTGAGGCACGATTCTCCGAGGTAAATGAATCTGCCGAGCGAGCATCATCCCAACAGTCAGCATTGCAACAAGAGTTAGAGCGCACAAGGAAACAAGCAAATGAGGCATTGAAAGCGATGGATAATGATAGGCAACAGCTAAGAAGTGCAAACAACAAACTTCGAGATACCATTGAGGAATTACGGCGTTCATTGGAACCTAAAGAGAATGCTCTTGAGGCATTGCAGTTGTCACTTGCAGAAAAAGAACAGATGCTGGAAGATTCAAAAGGATTGCTTCAAGCTTCCGATGAAAAAAGGCAAGTTGCACTAACTGAGCTCTCTGCTAAGCATCAAAAGAATATAGAGAGTTTGGAGGCTCAACTCAATGATGCTTTGTCTGATAGAAGTAAGGCAGATGAATCCATTTCTTCACTGCAGGTTCTAGTGGCAGAAAAAGAATCTAGAATTGCAGAGATGGAGGCAGCATCAACTGGGGAAGTAGCACGACTCAGAGCAGCCATGGAAAGCGTGAAGGGGGAGATTTCTCACTTAAAACAGGAACATGAAAAAGAAAGGGAAAGCTGGGAGGCTGCATCTCAGGCACTTAAAGCGAAGCTTCAAATTGCTGAGAGCAACTGTATACGTGCAGAAGTTGAAGTGGCAAAAATACGAAGTCAGCTTGAATCAGAGGTATCTGCACAAGCCAAGATCCTCACTATGAGAGATGCTGAACTGTTAGCTGCCAAAGAAGAGATCAGCAGTCTTGAGAGGGATTTTTCTTCATACAAGGCTCGTGCACATGCACTTCTTCTAAAGAAGGATGCAGACCTGGTTGCAGCTAAAGACTCTGAACAACTCAAAGCTCTTGAGGAGGCTCTTAAAGAGGCTGAAAATGAAGTATCATCAATAACAGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCGGCCATGGCCAATAATGAGAAAGAACTTGCAGAAAGAGACACTGCCATTGAAAGTGTCAAGCAACAGATAAGGAGTTTAGAAATAAAGCTCGACTCAGTTACTGCTCAGCACCTTAAAGAGAAAGAGGAATGGGGACTAAGCCTTAAAAATGTAGAAGAAACATGGAGAGTCAGATGCGAGGCAATGAAGGCCGAAAATGAAGCAGCTGCTGCAGAAGATATGCAAAAGGAATTGGAAGATCTCAAACAGAGATGTAAAAAATTGAAGGAAGAACATGCTTCATTTCATGATCTTGCTGATAGAATGATTGAGGACAAAGATAGTGAAATATCCAGACTTCTAGATGAAAATAAGAATCTCCGCCAGTCTCTTCAATCAAGACCACGTGCCAGTCAGAATGATCATTACAACACAGCCTTGCATCAATTGGATTCAAGTAATTTAAGTCCCTCAGATGCTGAACATCAAATTCTGATTTTGGCTAGACAACAGGCCCAAAGAGAGGAAGAGCTAGCACAGTCGCAGCGCCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACATGAAAATCGTCTCCACAGCCAACAGGAGGCAATGTTGAAGTCTGAGCTTCGCAACATGGAAAGAGCGAAGAAAAGGGAAGGTGTAGATATGACATATTTAAAAAATATTATCTTAAAGCTTCTAGAGACAGGTGAAGTGGAAGTATTACTACCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATACAGAAATGTCAACAGACATATCAAAACTCAACAGATGCTGCGCCAACTCCTGCAAGTGAAACATCAGGATCTGGGCTCTCTCTTTTCTCAAGATTCTCATTTTCCTAA 2415 0.4128 MASGEDETGGMMEIPAEDSSRTEEHLSDSDTNHQNKDGSNINLVMENGLSDGNERQADTYDQLLQMVVDLKFQNEFLKSQFEGFSNVNSVSSDSSIQKGAGGVEDGESDIVKELRERIESLNKEFLEEKQTRIASEEALKHLQILYSDAEAKAKDLSEQLVEAQNKSEREIKDRDEKYSELDAKLNRLHKRAKQRIQEVQKEKDDLEARFSEVNESAERASSQQSALQQELERTRKQANEALKAMDNDRQQLRSANNKLRDTIEELRRSLEPKENALEALQLSLAEKEQMLEDSKGLLQASDEKRQVALTELSAKHQKNIESLEAQLNDALSDRSKADESISSLQVLVAEKESRIAEMEAASTGEVARLRAAMESVKGEISHLKQEHEKERESWEAASQALKAKLQIAESNCIRAEVEVAKIRSQLESEVSAQAKILTMRDAELLAAKEEISSLERDFSSYKARAHALLLKKDADLVAAKDSEQLKALEEALKEAENEVSSITEERDRVLQDLQSAMANNEKELAERDTAIESVKQQIRSLEIKLDSVTAQHLKEKEEWGLSLKNVEETWRVRCEAMKAENEAAAAEDMQKELEDLKQRCKKLKEEHASFHDLADRMIEDKDSEISRLLDENKNLRQSLQSRPRASQNDHYNTALHQLDSSNLSPSDAEHQILILARQQAQREEELAQSQRHILALQEEIEELEHENRLHSQQEAMLKSELRNMERAKKREGVDMTYLKNIILKLLETGEVEVLLPVIGMLLQFSPEEIQKCQQTYQNSTDAAPTPASETSGSGLSLFSRFSFS 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02799 804 Coils Coil 366 425 - -
Vivi2g02799 804 Coils Coil 478 512 - -
Vivi2g02799 804 Coils Coil 531 558 - -
Vivi2g02799 804 ProSiteProfiles GRIP domain profile. 728 775 IPR000237 -
Vivi2g02799 804 Coils Coil 104 131 - -
Vivi2g02799 804 Coils Coil 576 613 - -
Vivi2g02799 804 SMART 1grip 731 775 IPR000237 -
Vivi2g02799 804 MobiDBLite consensus disorder prediction 211 233 - -
Vivi2g02799 804 MobiDBLite consensus disorder prediction 215 232 - -
Vivi2g02799 804 MobiDBLite consensus disorder prediction 33 56 - -
Vivi2g02799 804 Coils Coil 139 173 - -
Vivi2g02799 804 Coils Coil 679 730 - -
Vivi2g02799 804 MobiDBLite consensus disorder prediction 1 56 - -
Vivi2g02799 804 Coils Coil 618 638 - -
Vivi2g02799 804 Coils Coil 182 297 - -
Vivi2g02799 804 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 68 790 - -
Vivi2g02799 804 Coils Coil 313 361 - -
Vivi2g02799 804 MobiDBLite consensus disorder prediction 17 32 - -
Vivi2g02799 804 Coils Coil 444 464 - -
Vivi2g02799 804 Pfam GRIP domain 732 771 IPR000237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02799 Vivi-Chr2 123987943 124000082 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02799 - - tpra:123905639 1268.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02799 2 123987943 124000082 Vivi2g02799 2 123987943 124000082 ECH