Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02793 ATGCTCAGAACTAACAACAATAACAAGCGCGGAGTGCTTACTCGTTTGAAAACCCTCATCAATAACTCACGGCTTTTCTGCTCCTCTTCTCCCGAAGGACCAATGCAAGATCATCCTTCTTCAGAAACAGAATCCGATCACTCAATTGGGCGAGGCCGCATTGACATTTCAAAAGGGAAGACTTTCGATGCAAGGAAGCTTGGTATTACCAGTTCTATGATTTCACAGCCGACTCAGTATGTCCTGAAGCTTCTTCAGGATAAAGGGTATAAGTCCTACTTAGTAGGTGGGTGTGTGAGAGATCTACTACTGAATAGAACTCCAAAAGATTTTGACGTGGTCACCACAGCACAGCTTATGGAGGCAAGGAGGCAATTTCGTCGTTCAGCTCGTCGTGCTGACGTTGTTGGACGGCGTTTTCCAGTACGCCTGGTTCATATAAAAGGTTCGATAGTAGAGGTAACAAGTTTTGAGACAGAATCAAAAACTTCCAAAGGGATGGAAAAAGTTTTACACTCTCTGCTGCCAAAATGCAGTAATAAAGAAGACAAATATTTATGCAAAAGTACACTGCGAAGGGACTTCACAGTTAATAGTTTATTTTATGATCCTTTTGCCAATAAAATTTATGATTATGCCAATGGAATTGCTGATTTGAGGTCCTTAAAGCTAGAAACCGTGATTCCAGCTCAGCTGTCCTTTAAAGATGATCCTGGGAGAATTTTACGTGGATTCAGAATTGCAGCTCGTCTAGGTTTATCATTATCCAGGGAGACTGAGGCAGCAATCTGGACATGTTCTTCCCTAGTTAAGGATTTGAACAAGGATAGAATGCTGATTGAATTAAACTATATGCTGTCTTATGGAGCTTCTGAGCCGTCTCTGCGCTTACTCTGGAAATTCAAATTGCTACAGTTTTGGCTTCCGATGCATGCAGCATATCTTGACGAACAGGCTACTAAAGAAGATGGTCAGGCTTCCAATATGTTGATGAAATTATTCTCCCATCTGGATAATTTGGTTGGATGCGATCGACCTTCTGGTTGCACCCTATGGATTGGATTGCTAGCATTTCACCTGGCATTAGTAAATAATCCCCAAGATGTTCTTGTGGTCTGGGCATTTGCTTCTGTTCTATATCACGGAGAGTGGCAAGAAGGCATTACGTTTGCTAAAGAACATGCAAAAATGTATGTTAATTTTACACCGGAAATAAAGAGTTCCAATACAAGCAAATCAGATGAAGAAATTGCAGAAACAGTCACTAAATTGGCATCTTTGGTGATTGGCTCCATTCATGCGCTAGTTAATATTAACCGTCTTTTCCAATCTCTGTCTAGATATCCATCTGTCCCACGCCCTCATGTGGTAATTTTATCAAGAAAAACAGGGAAAGCCGTGTCTGAAATTTTCGAAGTGCTGATCAATGATATTAAATTTTACAAGAGTAAAAGAAAAAGTGCAAAGATAAATTATGACATGCTTGGGAGTGGCCATATTTCAGAGACAAGATTTGTTTTGGGCAAAATTATTCTTGAAACTATGCGGAGTGGGAGTGGAGTCCTTGGAGACAAGGATGGTTCTGAGGTGGAAAAATGTCACCTTAACACCGAGGGCACAAAGGGCTCTGGGCAACTAGTGGCAAAGAAAGATAAAAGAAAGGTTTTATCGACACCAAATTTAGAACATAAGCCAGAAAAACTCAAAAAACAGAAACTGACTGAGCATACAGACATTGCAGAGCAGAAAAAGGGATTGGTTGAAAGTTTTAAGTACAAGGAAACTGATGAAGAGCACCAAAAGCCGGTTAAGTTGGGCCAGGAGGTTGATCTATCTAAGAAGAACTCTATGCCAGTAAATAAATGCAGTAATAGAGAACAGTTGATAAATGATATTGATAGGAAGCAAATTGTCAGTACCAGTAAAAGTTCTGAAGACCGTGCTAGGCATCCAAAGTTGAAAGAGCACCGCACGTCATCACATTCTACAGCGTCTAAGAATAATAAGGTAGTAGCCAATAACCACAACATAAACACGGGTGTAACAACAGATGAGTCGGCTGACAAAGTTGTCAACGAGAAAGGAAGACAGCAGCCACAAAAAAGTAAAAAAGGTCTGTCTCCACTCTCCAGTTTATTCAAGAAAAACAGAAGATAA 2157 0.4047 MLRTNNNNKRGVLTRLKTLINNSRLFCSSSPEGPMQDHPSSETESDHSIGRGRIDISKGKTFDARKLGITSSMISQPTQYVLKLLQDKGYKSYLVGGCVRDLLLNRTPKDFDVVTTAQLMEARRQFRRSARRADVVGRRFPVRLVHIKGSIVEVTSFETESKTSKGMEKVLHSLLPKCSNKEDKYLCKSTLRRDFTVNSLFYDPFANKIYDYANGIADLRSLKLETVIPAQLSFKDDPGRILRGFRIAARLGLSLSRETEAAIWTCSSLVKDLNKDRMLIELNYMLSYGASEPSLRLLWKFKLLQFWLPMHAAYLDEQATKEDGQASNMLMKLFSHLDNLVGCDRPSGCTLWIGLLAFHLALVNNPQDVLVVWAFASVLYHGEWQEGITFAKEHAKMYVNFTPEIKSSNTSKSDEEIAETVTKLASLVIGSIHALVNINRLFQSLSRYPSVPRPHVVILSRKTGKAVSEIFEVLINDIKFYKSKRKSAKINYDMLGSGHISETRFVLGKIILETMRSGSGVLGDKDGSEVEKCHLNTEGTKGSGQLVAKKDKRKVLSTPNLEHKPEKLKKQKLTEHTDIAEQKKGLVESFKYKETDEEHQKPVKLGQEVDLSKKNSMPVNKCSNREQLINDIDRKQIVSTSKSSEDRARHPKLKEHRTSSHSTASKNNKVVANNHNINTGVTTDESADKVVNEKGRQQPQKSKKGLSPLSSLFKKNRR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02793 718 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 24 524 - -
Vivi2g02793 718 MobiDBLite consensus disorder prediction 592 608 - -
Vivi2g02793 718 MobiDBLite consensus disorder prediction 663 686 - -
Vivi2g02793 718 MobiDBLite consensus disorder prediction 535 580 - -
Vivi2g02793 718 SUPERFAMILY Nucleotidyltransferase 67 220 IPR043519 -
Vivi2g02793 718 Gene3D Beta Polymerase, domain 2 60 221 IPR043519 -
Vivi2g02793 718 Pfam Probable RNA and SrmB- binding site of polymerase A 252 314 IPR032828 -
Vivi2g02793 718 CDD NT_ClassII-CCAase 78 220 IPR002646 GO:0003723|GO:0006396|GO:0016779
Vivi2g02793 718 MobiDBLite consensus disorder prediction 545 580 - -
Vivi2g02793 718 Gene3D - 224 443 - -
Vivi2g02793 718 MobiDBLite consensus disorder prediction 27 53 - -
Vivi2g02793 718 SUPERFAMILY Poly A polymerase C-terminal region-like 224 377 - -
Vivi2g02793 718 MobiDBLite consensus disorder prediction 592 718 - -
Vivi2g02793 718 MobiDBLite consensus disorder prediction 39 53 - -
Vivi2g02793 718 Pfam Poly A polymerase head domain 93 223 IPR002646 GO:0003723|GO:0006396|GO:0016779
Vivi2g02793 718 MobiDBLite consensus disorder prediction 627 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02793 Vivi-Chr2 123826300 123833619 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02793 - - tpra:123905643 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02793 2 123826300 123833619 Vivi2g02793 2 123826300 123833619 ECH