Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02773 ATGTCTGAATCCGAAGAGTCCTCTTCATACCCTCCCATAGACCCGGTGAACTTCGATCTCATCATCATCGGCACTGGCCTTTCCGAATCGATTATCGCCGCCGCCGCATCGGCCGTCGGAAAGACAGTCCTCCACCTTGACCCTAATTCGTTCTACGGCAGCCATTTTGCTTCTCTTTCTCTAGAAGAAATCACCTCTTACCTCAATTCCCCTCCCAAATCCTCCACCGCCGCCGCATCATCAAGCGATGATTCCGATTACGCCGTCATAAACCTCATACATCAACCTCTTATATCCAGCGCTGAGCTCATTTCATGCGATTCAGTCGACCAATCCACGTTTCTTCTAGAAAATTCGAGAAAGTTCAACCTCGATTTGGGAGGACCTAGGGCTTTGTTCAGCGCGGACAAGACAATCGACTTATTATTGAAATCAGGTGCTGCACAGTACTTGGAGTTCAAAGGCATCGACACGAGTCTCGTGTACAACGCAAGTGAGGGTTTGGTTAACGTGCCAGATTCACGTGGAGCCATTTTTAGAGACAAGAAGCTTTCGCTTAAGGAAAAAAACCAGTTGATGAAGTTCTTCAAGCTTGTTCAGAAACACTTGGGTGGTGATGATGAGGATGGAAGGATTTCAGAGGAAGACATGGAGAGTCCTTTTGTTAGTTTCTTGGAGAAAACCGGGTTGCCGCCAAAGATAAAAGCGATTCTTTTGTATGCTATAGCCATGGTAGATTTTGATCAAGAAAATAGCGAGGTTTGTAAAGAGTTACTTACAACAAAAGATGGAATAGATCGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCCAGTGCACCGGGGGCTTTGATTTATCCTATATACGGTGAAGGAGAACTACCACAAGCTTTTTGTCGTCGTGCGGCTGTCAAAGGTGGCATTTATGTTCTCCGAATGCCGGTTATTTCTCTGCTTATGGATAAGGTTACCGAGTCGTATAAAGGTGTTAGATTAGCTTCGGGTCAGGATTTATATAGCCATCAGCTAATCTTAGATCCGTCCTTCACAATTCCATCAGCACAGTCGTTGTCTCCTAAAGGAATGGTGGCAAGAGGAATATGCATCACGAGGAGTTCCATAAAGCCAGATGTGTCAAATTGCTCTGTGGTGTATCCTCCTAGATCTCTATATCCTGATCAGGTTGCATCAGTCAGAGCTCTTCAGATAGGATCAAATCTCGCAGTTTGTCCCGCGGGCACCTTTGTTTTGTATTTTTCCACTTTGTGCAATGATCCCGATGAAGGAAAGAAGTTACTAAAAGCATCCATGAAGGCTCTTTTTACATTGCCTGTATCTGGAAACACAGAAACCAACGTTCAAAGTGACAGTGAAGATAAAAAAGCCGTTGTGCTCTGGAGTGCAATTTATGTTCAAAAATTAACTATGAGCAAATTTGAAGCTATTAGTTCCGCTCCAACACCAGATGGAAATCTAAACTACAATGACCTTATAGATGCAACTGAGGAGCTATTTAGTCAAATGTACCCTAATGAAGAGTTCTTTCCAAAGACGACATCCTCTGAAGATTCCACGGACGACGACGATGATAATGGGATAATTATGGAAAGCTAA 1617 0.4385 MSESEESSSYPPIDPVNFDLIIIGTGLSESIIAAAASAVGKTVLHLDPNSFYGSHFASLSLEEITSYLNSPPKSSTAAASSSDDSDYAVINLIHQPLISSAELISCDSVDQSTFLLENSRKFNLDLGGPRALFSADKTIDLLLKSGAAQYLEFKGIDTSLVYNASEGLVNVPDSRGAIFRDKKLSLKEKNQLMKFFKLVQKHLGGDDEDGRISEEDMESPFVSFLEKTGLPPKIKAILLYAIAMVDFDQENSEVCKELLTTKDGIDRLAQYSSSVGRFPSAPGALIYPIYGEGELPQAFCRRAAVKGGIYVLRMPVISLLMDKVTESYKGVRLASGQDLYSHQLILDPSFTIPSAQSLSPKGMVARGICITRSSIKPDVSNCSVVYPPRSLYPDQVASVRALQIGSNLAVCPAGTFVLYFSTLCNDPDEGKKLLKASMKALFTLPVSGNTETNVQSDSEDKKAVVLWSAIYVQKLTMSKFEAISSAPTPDGNLNYNDLIDATEELFSQMYPNEEFFPKTTSSEDSTDDDDDNGIIMES 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02773 538 MobiDBLite consensus disorder prediction 524 538 - -
Vivi2g02773 538 SUPERFAMILY FAD-linked reductases, C-terminal domain 362 473 - -
Vivi2g02773 538 PRINTS Rab GDI/REP protein family signature 291 312 IPR018203 GO:0005092|GO:0007264
Vivi2g02773 538 PRINTS Rab GDI/REP protein family signature 138 154 IPR018203 GO:0005092|GO:0007264
Vivi2g02773 538 PRINTS Rab GDI/REP protein family signature 188 203 IPR018203 GO:0005092|GO:0007264
Vivi2g02773 538 PRINTS Rab GDI/REP protein family signature 37 54 IPR018203 GO:0005092|GO:0007264
Vivi2g02773 538 PRINTS Rab GDI/REP protein family signature 19 37 IPR018203 GO:0005092|GO:0007264
Vivi2g02773 538 MobiDBLite consensus disorder prediction 515 538 - -
Vivi2g02773 538 Pfam GDP dissociation inhibitor 116 440 IPR018203 GO:0005092|GO:0007264
Vivi2g02773 538 Pfam GDP dissociation inhibitor 17 104 IPR018203 GO:0005092|GO:0007264
Vivi2g02773 538 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 171 284 - -
Vivi2g02773 538 FunFam Rab proteins geranylgeranyltransferase component 171 284 - -
Vivi2g02773 538 PIRSF Rab_ger_ger_transf_A_euk 1 111 IPR001738 GO:0005968|GO:0006886|GO:0018344
Vivi2g02773 538 PIRSF Rab_ger_ger_transf_A_euk 99 538 IPR001738 GO:0005968|GO:0006886|GO:0018344
Vivi2g02773 538 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 96 475 - -
Vivi2g02773 538 Gene3D - 15 515 IPR036188 -
Vivi2g02773 538 PANTHER RAB GDP-DISSOCIATION INHIBITOR 14 520 IPR018203 GO:0005092|GO:0007264
Vivi2g02773 538 SUPERFAMILY FAD/NAD(P)-binding domain 16 349 IPR036188 -
Vivi2g02773 538 FunFam Rab proteins geranylgeranyltransferase component A 14 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02773 Vivi-Chr2 123164690 123170232 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02773 K23460 - gmx:100795946 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02773 2 123164690 123170232 Vivi2g02773 2 123164690 123170232 ECH