Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02762 ATGGCGACGATAAGGCCATTGCCGGAATCTGTTCGTAGCTCAATTCGTTCTGGCATTTCCTTGTTCGATTTCACAAGAATCGTCGAGGAACTTGTTTTCAATAGCCTCGATGCCCGTGCTACAAAGGTATCAGTGTTTGTTAATGTTGGGAACTGCTTCTTAAAAGTAGTTGATGACGGAGATGGAATTACTCGAGATGGACTGGAATTGGTGGGAGAAAGATATGCAACATCAAAATTTCTTAATTTGGCTGACCTAAATACCACAAGTGAAAACTTTGGTTTTCGTGGTGAAGCTTTAGCTTCCATTTCCGAAGTCTCTTTGTTGGAAATAGTGACAAGAGCTTCTGGAAGGCCAAATGGTTATAAAAAGGTATTGAAGGGGTGCAAGTGTTTATACCTTGGTATTGATGATGATAGAAAGGAAGTAGGCACAACAGTCATTGTCTGTGAAATATTTTACAACCAACCAGTTCGGAGGAAGCACATTGAGTCCAGCCCCAATAAGGTACTCCAATCAATCAAGAAATGTGTAATGCGGCTTGCACTTGTGTGCCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGAGAGGATGAGCTTTTCTGCTCACATTCTGCTGCTTCTCCACTGTCACTTGTAACCGCTGGCTTTGGGGTGGAGGTGACGAACTCTCTTCATGAATTAGAAGTTGAAAACAATATCATAAAGCTTACTGGATACATATCAGATCCTTGCAATACCCTAGATATGAAGGCTTTACAGTATCTCTATATTAACTCACAGTTCGTTTGCAAGGGACCTATTCATAAGCTTTTAAGTCAACTGGCTATTAGGTTTGAGCATCGTAACTCATGGAGTGCTGATAATGAATGCAAAAACAAAAAGAGAGACAGATCACAGCCATGTCCGGCTTATATCTTGAATTTAAGGTGCCCCCGCTCTTTATATGTTTTGAGCTTTGGGCCATCAAAAACTTATGTTGAATTCAAGGATTGGACTCCAATACTAAACTTCATTGAAAAGGTCATCAAACATTTCTGGGAGGGAAGCATAGCATATGGAGATTCCATCAATAAAGCCACTTATACTGTTCAAAAAGATCAACAGGAAAAAGTAGATCTAGATGTCAACACCATTTCAGCGGAAGCAGATATATCAAAATTTGGAAACCAAAATCGTAAAGGTTGTTTAGACCTCTTCTTTTCCACTTCAGACAAGCTAACTGAAGATGACAATCATGAATGCAAAAGGGAGGATGTTAGAACCAATGTTGGTTACTTACATCGAAGGACTGAGATGTTCAAAGATAAACAAAACATGGGAGGGCTTCATTGTTGGACCGGTTATTCTGGAAATTTACTAGACGTTTCATACGCCAAAAGCATGGTTACCACTAAGAAAAAGAACAACAATTTTTTGACGTATGATAACAATGATTTGTTGCAAGGAGTTTATTTTTCAGATGGTATGCGTCCTGCTGTAGAAAATTTATATGATAATATACCTTTTTATGCAACAAGCTCTTCACATGGAAGAAAATTAGATAAAGTAGATGCTAGTGTGCTATGTGAATCATTTGAAGGTGATTCCATTTATGACTCCTATGGGTTCGGTTATGATGTAGAGATTGATGGGGATTTTCAAAAGCCTTTTCTAAAAAGCTGCTCTACACAAAAAGGAAGTATTCTGCATGAGAAGGCTTTGCTCGTAAATAATGAGCCTGAACTCCAAACCTTTAGCTTTTGGAGCAAGCAAAATCTAGGGGGGGATTGTTTCATAGGTAAGGATTTAAATGCCCTTCCATGTGTAGAAGTTGCAAAAAAATTGAAGATGTCTGAAGATTCTGATTTTCTTTTAAGAGCACAGTCTAAAGAAAATTGTCGACCTTCAGTTTCATGGTATTCAGCAACACAAATAGGAAACTCTAGTTCTGGTGATCAGTTACCAAACTCTGAAAGGCATCCTGTTTATCAAAGTCCCTCACCTAAGGCTACTGCATTGGGTGTTTATCATACCAATGATATTAGTGATCTTCAAAGAGCATCTAGATGCTATGAAAGGACTCACCATACACAAAATTTTTACGATGAAGAAATTGGGAACAACTTCAGTTACAATCTTGAGGGAGCATCTAAATACTGCAAAAGGATCCATCGTACACATGTTTTTGATGATGAAGAAAAAGAATACAATTTCAGTTATGATATGTCAAGGCATGCTAACCAGCAAACCTGCACCTCAAGTTTTGCAAATAGTGGATTTAGTTTTGATGGTGCTGTTGATTTTAATGAAATTCTTAACCGATTGGTTGACTGGCCTGATTTCAGTGATTCATATTTCCCAAAAAGATCGGATATTTTAAATGAGGAAACCAACTTGCTATTAACTGAGTCATATGTTGGAAACTGTACGAGACCCAACATTAGCAACGGCAAAAGGGATCGTTTTAGGCATCCAGTTTTGGAGAAGACTCATGTTAGATCGAAAAGAAGCTTCTCAGCTCCACCATTTCATAGAAGTAAAAGGAGGTTTTTCTCTTTAAATCAACTTCCAGATATGATAGCTGAAAGATATACTGGCCAAGCATCCCAACCTACTACCAATCTTCTAGAAGCCAGTGATTTTAAATATTCTCAACATCCTTCTGGTGCTTTTCACCCCAGCAATGAAGATCTGTTGCAAGATTTGAAAACTAATGAAAAACGGAGTTCAGAGTTTCTCGGGGCTCCACAGATTGATGACATTGCCAAGACTGATGGTTTTGAAAGTTTCAATGTTCAACAGAATGATCAATTCAGGGAATTGATATCTAGGGAAGTGCAAGATCCCATAGATTATGGGAACAAATGGAGGAGCCACTCACCTCAAACTCAAAAGAACGATAAACTAATTGATATTGGAAATCAAAACAATATACTTGACATTTCTTCTGGATTCTTGCATCTTGCCGGAAATTCACTAATACCTGAAACAATTAGTAAGAAATGCCTCGAGGATGCCAAAGTTCTCCATCAGGTCGATAAGAAATTCATTCCAATCATGGCTGGCAAAACCCTTGCCGTTATTGATCAGCATGCCGCAGATGAAAGAATCAGACTAGAAGACTTACGTCAAAAGGTATTATCTGGAGAAGCAAAAGCAATAACCTATCTAGACGCTGAACAGGAGCTGGTGCTGCCAGAGATGGGTTATCAATTGCTTAATAGTTACAGTGAACAGATAAAAGATTGGGGATGGATCTGTAAGATTCATACTCAAAATTCTGATTCCTTTAGAAGGAATTTGGATATTCTCAACAAACAACAAATGACCATCACCCTTGTTGCGGTACCGTCCATTTTAGGTGCCAATTTAAACGATGTTGATCTATTAGAGTTTCTTCAGCAGCTTGCTGAAACTGATGGATCATCAACAATGCCACCCTCCGTTGTACGACTCCTAAATTCGAAAGCGTGCAGAGGTGCAATTATGTTTGGGGATTCATTGCTACCATCAGAATGTTCCCTTCTAGTTGAAGAGCTAAAGCATACATCACTCTGTTTCCAGTGTGCTCATGGACGACCAACCACTGTTCCTCTAGTCAACTTGGAGGCACTGCATGATCAAATTGCCCAGTTTGGACTGATGAATGAGGGCTCAAGTAATGATAAGTGGCATGGCTTACAAAGACATAAAGTGTGTTTAGAACGAGCAGTCCAGCGTTTAAGTTCTGCTAGGAGTTGA 3726 0.3886 MATIRPLPESVRSSIRSGISLFDFTRIVEELVFNSLDARATKVSVFVNVGNCFLKVVDDGDGITRDGLELVGERYATSKFLNLADLNTTSENFGFRGEALASISEVSLLEIVTRASGRPNGYKKVLKGCKCLYLGIDDDRKEVGTTVIVCEIFYNQPVRRKHIESSPNKVLQSIKKCVMRLALVCPNISFKVVDIEREDELFCSHSAASPLSLVTAGFGVEVTNSLHELEVENNIIKLTGYISDPCNTLDMKALQYLYINSQFVCKGPIHKLLSQLAIRFEHRNSWSADNECKNKKRDRSQPCPAYILNLRCPRSLYVLSFGPSKTYVEFKDWTPILNFIEKVIKHFWEGSIAYGDSINKATYTVQKDQQEKVDLDVNTISAEADISKFGNQNRKGCLDLFFSTSDKLTEDDNHECKREDVRTNVGYLHRRTEMFKDKQNMGGLHCWTGYSGNLLDVSYAKSMVTTKKKNNNFLTYDNNDLLQGVYFSDGMRPAVENLYDNIPFYATSSSHGRKLDKVDASVLCESFEGDSIYDSYGFGYDVEIDGDFQKPFLKSCSTQKGSILHEKALLVNNEPELQTFSFWSKQNLGGDCFIGKDLNALPCVEVAKKLKMSEDSDFLLRAQSKENCRPSVSWYSATQIGNSSSGDQLPNSERHPVYQSPSPKATALGVYHTNDISDLQRASRCYERTHHTQNFYDEEIGNNFSYNLEGASKYCKRIHRTHVFDDEEKEYNFSYDMSRHANQQTCTSSFANSGFSFDGAVDFNEILNRLVDWPDFSDSYFPKRSDILNEETNLLLTESYVGNCTRPNISNGKRDRFRHPVLEKTHVRSKRSFSAPPFHRSKRRFFSLNQLPDMIAERYTGQASQPTTNLLEASDFKYSQHPSGAFHPSNEDLLQDLKTNEKRSSEFLGAPQIDDIAKTDGFESFNVQQNDQFRELISREVQDPIDYGNKWRSHSPQTQKNDKLIDIGNQNNILDISSGFLHLAGNSLIPETISKKCLEDAKVLHQVDKKFIPIMAGKTLAVIDQHAADERIRLEDLRQKVLSGEAKAITYLDAEQELVLPEMGYQLLNSYSEQIKDWGWICKIHTQNSDSFRRNLDILNKQQMTITLVAVPSILGANLNDVDLLEFLQQLAETDGSSTMPPSVVRLLNSKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHDQIAQFGLMNEGSSNDKWHGLQRHKVCLERAVQRLSSARS 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02762 1241 SMART MutL_C_2 1003 1163 IPR014790 GO:0005524|GO:0006298
Vivi2g02762 1241 MobiDBLite consensus disorder prediction 642 662 - -
Vivi2g02762 1241 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Vivi2g02762 1241 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1199 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Vivi2g02762 1241 FunFam MUTL protein homolog 3 1047 1158 - -
Vivi2g02762 1241 Gene3D - 215 352 IPR014721 -
Vivi2g02762 1241 Pfam DNA mismatch repair protein, C-terminal domain 217 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Vivi2g02762 1241 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Vivi2g02762 1241 SUPERFAMILY DNA mismatch repair protein MutL 1001 1194 IPR037198 -
Vivi2g02762 1241 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 23 201 IPR036890 -
Vivi2g02762 1241 NCBIfam DNA mismatch repair endonuclease MutL 4 390 IPR002099 GO:0005524|GO:0006298|GO:0030983
Vivi2g02762 1241 FunFam DNA mismatch repair endonuclease MutL 1 213 - -
Vivi2g02762 1241 Pfam MutL C terminal dimerisation domain 1002 1163 IPR014790 GO:0005524|GO:0006298
Vivi2g02762 1241 Gene3D - 2 207 IPR036890 -
Vivi2g02762 1241 Gene3D - 1006 1194 IPR042120 -
Vivi2g02762 1241 MobiDBLite consensus disorder prediction 642 659 - -
Vivi2g02762 1241 Gene3D - 1047 1158 IPR042121 -
Vivi2g02762 1241 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 120 - -
Vivi2g02762 1241 SUPERFAMILY Ribosomal protein S5 domain 2-like 200 349 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02762 Vivi-Chr2 122833427 122844672 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02762 K08739 - gmx:100788019 1630.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02762 2 122833427 122844672 Vivi2g02762 2 122833427 122844672 ECH