Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02662 ATGGTGCACGCTAGGGTTTTCGGAGCATTTGCCGGCCGAGCGCTCATGGCAGCGGCGGCGGCGGCGAAGGGAGCTGCCAAGAAGACTGCTGCTTCCGCCGCAGCTACCTCCACAGCTGCCGTGAAGAAAACGCCGGTGAGCAGAGGTAGCGGAGGCATACAGAAAGTCGTTCCGGTCACTTCTGAGCTCGGCAAATTCATCGGTTCACCTCAGGTTTCTAGAACTGAAGCTGTTAAGAAAGTGTGGGAATACATCAAGCTGCAAAATCTTCAGAATCCTGACAACAAGAGGGAGATTTTTTGTGATGATAAGCTGAAGACCATTTTCGATGGGAAAGATAAAGTAGTGTTCACTGAGATTGCCAGATTGCTGGCTAACCACTTTGTGAAATCGTCCTGA 399 0.5113 MVHARVFGAFAGRALMAAAAAAKGAAKKTAASAAATSTAAVKKTPVSRGSGGIQKVVPVTSELGKFIGSPQVSRTEAVKKVWEYIKLQNLQNPDNKREIFCDDKLKTIFDGKDKVVFTEIARLLANHFVKSS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02662 132 Gene3D SWIB/MDM2 domain 46 132 IPR036885 -
Vivi2g02662 132 ProSiteProfiles SWIB/MDM2 domain profile. 52 130 IPR003121 -
Vivi2g02662 132 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 27 129 - -
Vivi2g02662 132 Pfam SWIB/MDM2 domain 57 128 IPR003121 -
Vivi2g02662 132 SUPERFAMILY SWIB/MDM2 domain 47 130 IPR036885 -
Vivi2g02662 132 CDD SWIB-MDM2_like 57 128 - -
Vivi2g02662 132 SMART swib_2 53 132 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02662 Vivi-Chr2 119717840 119719589 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Vivi2g02662 SWIB 2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02662 - - adu:107487278 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02662 2 119717840 119719589 Vivi2g02662 2 119717840 119719589 ECH