Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02595 ATGGCTTTCAACAACAAATCCAAGAAGTATAATTCACCTAATTCTCATTGCAATTTCTGCATCACCCTTTTCTTCATTTCCCTCTTCACTATACCAACTTATTTCATTCTCAACAACACCACCACAAACTCCAAATGCACCAAGCTCACCAAAAGTTTTTCAGGCGATCTTCTTTCAGCCGAGTTTGCATGGAACAGCCTTTCATTTTCACAACACAATAACCCTTCGCCTATAGTTCTCAAAATTGCAGTCTTTTCTAGAAAATGGCCTATTGGAACTGTTCCTGGTGGCATGGAACGCCATGCTCACACCCTTCACACTGCTTTAGCTCACCGCGGACATCAAGTTCATGTTTTTACTTCACCCTCAGAAGAAGATGAAACAACAACAAAAACAACAACAACAAGAACAACAACTTTAATCTCATCAAAAGGTGCACCTTCTTCACCTTACATTCATTTTCATGAAGGCGAGCCGGGTAAGTGGCGTTACAACAAAGCATGGGAACTTTTTCTTGAAGAAAACCAAAGAGATCAACCTTTTGATGTTGTTCATTCAGAAAGTGTAGCACTTCCTCATTGGCTTGCAAAGGAACTTCCAAATCTTGTTGTATCATGGCATGGCATAGCATTGGAAAGCTTGCAGTCAAGCATTTTTCAAGACTTGGCCCGTTTGCCGGACGAGCCTAGATCCCAAGATTTTGAAAAGGGGTTACAAGGGGTTGTTCCTAAGATTCTCAATGAGATAAGATTCTTCAACAAATATTCTCATCATATTGCTATTAGTGATAGCTGTGGTGAGATGTTAAGAGATGTTTACCAAATTCCAAGTAGAAGAGTTCATGTGATTCTCAATGGTGTTGATGAGGAAGATTTTAGAGAAGATGTTGAATTAGGAAAAGAATTTAGAACCAAAATTGGAATTCCAAGTAATGCTAGTTTAGTATTTGGAGTAGCCGGAAGATTAGTGAAGGATAAAGGTCATCCACTACTTCATGAAGCATTTTCAAGGCTTATAACAAAACACACTAATGTGTATTTGATTGTAGTTGGTTCTGGACCTTGGGAAAATAGGTACAAAGATTTAGGGAACCAAGTTTTTACTCTTGGATCTATGAATCCTTCTATGCTAAGAGCATTCTATAATGCTATTGATATTTTTGTTAATCCTACATTAAGACCACAAGGGCTTGATCTTACACTAATGGAGGCTATGATGATTGGAAAGCCACTTTTAGCATCAAGGTTTCCGAGTATCAAAGGTAGTATTGTTGTTGATGATGAATATGGTTATATGTTTTCTCCAAATGTGGATTCACTTTTGGAAGCACTTGAAGAAGTGGTAAAGGATGGTAAAGAGAGGCTAGTGAGGAGAGGTAATGCTTGCCGCGAATATGCAAATTCTATGTTTACAGCAAGAAAGATGGCACTAGCATATGAGAGACTATTCTTATGCATAAAGAGGGATACATTTTGTACCTATCCTTGA 1488 0.3824 MAFNNKSKKYNSPNSHCNFCITLFFISLFTIPTYFILNNTTTNSKCTKLTKSFSGDLLSAEFAWNSLSFSQHNNPSPIVLKIAVFSRKWPIGTVPGGMERHAHTLHTALAHRGHQVHVFTSPSEEDETTTKTTTTRTTTLISSKGAPSSPYIHFHEGEPGKWRYNKAWELFLEENQRDQPFDVVHSESVALPHWLAKELPNLVVSWHGIALESLQSSIFQDLARLPDEPRSQDFEKGLQGVVPKILNEIRFFNKYSHHIAISDSCGEMLRDVYQIPSRRVHVILNGVDEEDFREDVELGKEFRTKIGIPSNASLVFGVAGRLVKDKGHPLLHEAFSRLITKHTNVYLIVVGSGPWENRYKDLGNQVFTLGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMIGKPLLASRFPSIKGSIVVDDEYGYMFSPNVDSLLEALEEVVKDGKERLVRRGNACREYANSMFTARKMALAYERLFLCIKRDTFCTYP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02595 495 Gene3D Glycogen Phosphorylase B; 311 470 - -
Vivi2g02595 495 CDD GT4_PimA-like 81 483 - -
Vivi2g02595 495 PANTHER GLYCOSYLTRANSFERASE 17 495 - -
Vivi2g02595 495 Pfam Glycosyltransferase Family 4 96 290 IPR028098 -
Vivi2g02595 495 Pfam Glycosyl transferases group 1 314 454 IPR001296 GO:0016757
Vivi2g02595 495 Gene3D Glycogen Phosphorylase B; 79 310 - -
Vivi2g02595 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02595 Vivi-Chr2 117339905 117341987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02595 1 495 Glycosyltransferase AT4G19460 62.253 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02595 - - gmx:100817087 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02595 2 117339905 117341987 Vivi2g02595 2 117339905 117341987 ECH