Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02585 ATGCTTGAAGAGCGGCCGATTTCGTTGAGACAAAGTCCTTCGAGGAGGAGGTTGTTGAGACCTGGGGTTGATACTGATGATAGGGGTTGGACCTCACTTCATGTTTACGCACGGAAAGGTGATATCAAACTGGTAAAAAAGCTTCTCAACCAAGGAATGGATGTTAATGTGACTGCATGGGGCCCTAAATCTAAAGGTGTGACCCCTCTCCACCTTGCTGCCGAAGGTGGTCACCTTGGAGTGATGGATGAACTGCTTGAGCGTGGTGCCAATATTGATGCTAGAACTAAGGGTGCTTGTGGCTGGACACCGCTCCACATTGCAGCAAAAGAGAGGAATAGGGATGCTGTGAAATTCTTGGTAGAGAATGGAGCATTCTTGCCTCCAGATATGAACGATAGCAGATTTAATCCTCCCCTTCATTACTGCCCAGGACTTGAATGGGCCTACGAGGAAATGAAGCGACTCCGACTCCGACAGGAAGAATTTTCTCCAGGGGAGACATCTTGCAGCTCTGAAGGTTAA 525 0.4838 MLEERPISLRQSPSRRRLLRPGVDTDDRGWTSLHVYARKGDIKLVKKLLNQGMDVNVTAWGPKSKGVTPLHLAAEGGHLGVMDELLERGANIDARTKGACGWTPLHIAAKERNRDAVKFLVENGAFLPPDMNDSRFNPPLHYCPGLEWAYEEMKRLRLRQEEFSPGETSCSSEG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02585 174 Pfam Ankyrin repeats (3 copies) 17 95 IPR002110 GO:0005515
Vivi2g02585 174 Gene3D - 62 162 IPR036770 -
Vivi2g02585 174 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Vivi2g02585 174 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Vivi2g02585 174 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Vivi2g02585 174 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Vivi2g02585 174 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Vivi2g02585 174 Gene3D - 6 61 IPR036770 -
Vivi2g02585 174 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED 26 125 - -
Vivi2g02585 174 SUPERFAMILY Ankyrin repeat 25 143 IPR036770 -
Vivi2g02585 174 SMART ANK_2a 28 57 IPR002110 GO:0005515
Vivi2g02585 174 SMART ANK_2a 65 94 IPR002110 GO:0005515
Vivi2g02585 174 SMART ANK_2a 100 133 IPR002110 GO:0005515
Vivi2g02585 174 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Vivi2g02585 174 Pfam Ankyrin repeat 100 125 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02585 26 141 Miscellaneous Gene Families AT5G02620 35.043 5.97e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02585 - - aprc:113868977 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02585 2 117072999 117077310 Vivi2g02585 2 117072999 117077310 ECH