Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02578 ATGGCTAATTATGAAGGACAAGTCTCTAGTGGTGGTAGCGATGTGAGATCAGGGAATATGATTTTTGAGCCTATTTTGGATGATGGAGTGTTTCGATTTGATTGTTCTGCTGATGATAGAGATGCAGCATATCCTAGTATTTCTTTTCTGAATAGCAAGGATAGAGAGACTCCCATCGCTAATACTCACAAGTTTCCTTCGTATATCCCTAGATTTGAGTGCCTTCTAGAGCAGCAAGTTGTTCAACTCGAGCTACCTACAGGTACTTCCCTCTACGGAACAGGAGAAGTTAGTGGACAGCTTGAGAGAACAGGCAAAAGAGTTTTCACATGGAATACTGATGCCTGGGGTTATGGTCCTGGAACTTCATCCTTATACCAATCACACCCATGGGTGTTAGCTGTTCTTCCAAATGGCGAGGCCCTGGGAGTTCTTGCTGACACTACAAGACGCTGTGAGATAGATCTAAGGAAAGAATCAACAATACGTTTCATTTCTCCATCCTCATATCCTGTCATTACATTTGGTCCTTTTGCTTCACCTACAGAAGTTTTGATATCTCTATCAAAAGCAATTGGAACCGTGTTTATGCCCCCAAAGTGGTCGCTAGGCTATCAACAATGTCGTTGGAGCTATTTATCTGATCAGAGAGTTCTGGAGGTTGCAAAGACATTTCGAGAAAAGAGCATACCATGTGATGTGATATGGATGGATATCGATTACATGGATGGTTTTCGTTGTTTTACCTTTGACAAGGAGCGCTTTAGGGATCCCAAGTCTTTAGTGGAAGATCTCCATTATAGTGGTTTCAAAGGTATTTGGATGCTTGATCCTGGGCTCAAGCAAGAAAAGGGTTATTTTGTATATGACAGTGGTTCTGAAAATGATGTCTGGGTCCAAAAGGCAGATGGAACACCTTTTGTTGGGGATGTGTGGCCTGGACCTTGTGTCTTCCCTGACTATGCACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAGGACTTCGTTTCCAATGGCGTTGATGGTATATGGAACGATATGAACGAACCAGCTGTCTTTAAGACTGTAACGAAAACAATGCCAGAGACCAATGTCCATAGAGGAGATGGTGAACTTGGAGGTTGTCAGAATCATTCTTTCTATCATAATGTGTATGGTCTTCTGATGGCAAGATCGACCTATGAAGGCATGAAACTGGCTAATGAAAATAAGCGTCCTTTTGTTCTCACCAGAGCTGGATTTAGTGGAAGCCAAAGGTATGCTGCAACATGGACTGGGGATAATCTTTCAACTTGGGAGCATCTTCATATGAGTATCTCTATGGTACTTCAGCTGGGACTCAGTGGTCAGCCACTTTCAGGTCCTGATATTGGTGGATTTGCTGGCAATGCAACACCGAGGCTTTTTGGAAGGTGGATGGGTGTAGGTTCCTTATTTCCCTTTTGCCGTGGGCATTCTGAAGCTGGAACCACTGACCATGAACCCTGGTCCTTTGGAGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAACAGGCGCTACCGTCTTATCCCCCTTATCTACACACTTTTTTATTTTGCTCATACAAGGGGCACTCCAGTGGCAACCCCTACTTTCTTTGCTGATACAAAAGATCCGAGCTTGAGGAAACTTGAAAATTCGTTTTTGCTTGGCTCAGTTTTAGTGTATGCAAGCACCACACGCACTCAGGGGTTGGATAAGTTGGAGGTTAATCTACCAAAGGGGATATGGCTGGGTTTTGATTTCGGTGATGCACATCCGGATTTGCCAGCTTTATATTTAAAAGGTGGCTCAATTATTCCCGTAGGCCTCCCTGTTCAGCATGTTGGAGAAGCTAAACCATCGGATGAATTGACACTTCTTGTGGCTTTAGATGAATCTGGCAAAGCGGAAGGTTTTCTATTTGAGGATGACGGCGATGGCTATGAATTCACTAAGGGCAATTATTTATTAACACATTATGTGGCTGAACTTCAATCGTCGGTTGTTACAGTGAGTGTGCACAAAACTGAAGGATCGTGGAAAAGACCTAAGCGCAACATCCACATTCAATTATTACTTGGCGGGGGTGCAACGGTTGATACTCGAGGAGTGGATGGGGAAGTTCTGCATGTTAGTTTTCCTTCAGAAGAGGAGGCATCAACACTGGTATCTACCAGTCAGAAGCAATACAAGGAACGTTTGGAAAAAGCAATTCAAATTCCTGATGCAGAAGACGAAGTTTCTGGACCCAAGGGTATGGAGCTTTCAAGAACTCCCATTGAACTGAAAAGTAGTGAGTGGCTTCTTAAAGTGGTTCCCTGGATTGGGGGTAGAATCATCTCCATGATACACTTTCCTTCAGGAACCCAATGGCTCCATGGCAGGATTGAAATCAGTGGATATGAAGAGTACAGTGGTACAGAATATCGTTCTGCTGGGTGTTCTGAGGAATATTCTATAATCAATCGAGAACTTGGGCATGCTGGAGAGGAGGAATCTGTGGTATTAGAGGGTGATATTGGTGGAGGATTGGTTCTTCAACGGAAGATATATTTTCCAAAGAATGCTGCTAACATCATCCAAATCAACTCTAACATAATAGCGCACAGCGTCGGAGCTGGTTCTGGAGGATTCTCAAGGTTGGTCTGCTTAAGAATTCACCCAACATTCAATCTTTTGCACCCGACAGAATCTTTTGTCTCATTTACTTCAATTGATGGATCGACGCATGAAGTATTTCCAGATGGTGGGGAGCAAATCTTCGAAGGACACCTTATTCCTAACGGTGAGTGGAGGCTCGTCGATAAATGTCTTGGCTTGGCACTGGTCAATCGATTTAATGTTAAAGAGATTTTGAAGTGTCTTGTTCACTGGGATTTTGGCACTGTCAACCTGGAGCTTTGGTCGGAGAGCAGACCTGTCTCAGAGCAATCTCCTATTGAGATTTCTCATCAGTACGAGGTTATACGAATTCCTTAG 2988 0.4361 MANYEGQVSSGGSDVRSGNMIFEPILDDGVFRFDCSADDRDAAYPSISFLNSKDRETPIANTHKFPSYIPRFECLLEQQVVQLELPTGTSLYGTGEVSGQLERTGKRVFTWNTDAWGYGPGTSSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIRFISPSSYPVITFGPFASPTEVLISLSKAIGTVFMPPKWSLGYQQCRWSYLSDQRVLEVAKTFREKSIPCDVIWMDIDYMDGFRCFTFDKERFRDPKSLVEDLHYSGFKGIWMLDPGLKQEKGYFVYDSGSENDVWVQKADGTPFVGDVWPGPCVFPDYAQSKVRAWWANLVKDFVSNGVDGIWNDMNEPAVFKTVTKTMPETNVHRGDGELGGCQNHSFYHNVYGLLMARSTYEGMKLANENKRPFVLTRAGFSGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGSLFPFCRGHSEAGTTDHEPWSFGEECEEVCRLALNRRYRLIPLIYTLFYFAHTRGTPVATPTFFADTKDPSLRKLENSFLLGSVLVYASTTRTQGLDKLEVNLPKGIWLGFDFGDAHPDLPALYLKGGSIIPVGLPVQHVGEAKPSDELTLLVALDESGKAEGFLFEDDGDGYEFTKGNYLLTHYVAELQSSVVTVSVHKTEGSWKRPKRNIHIQLLLGGGATVDTRGVDGEVLHVSFPSEEEASTLVSTSQKQYKERLEKAIQIPDAEDEVSGPKGMELSRTPIELKSSEWLLKVVPWIGGRIISMIHFPSGTQWLHGRIEISGYEEYSGTEYRSAGCSEEYSIINRELGHAGEEESVVLEGDIGGGLVLQRKIYFPKNAANIIQINSNIIAHSVGAGSGGFSRLVCLRIHPTFNLLHPTESFVSFTSIDGSTHEVFPDGGEQIFEGHLIPNGEWRLVDKCLGLALVNRFNVKEILKCLVHWDFGTVNLELWSESRPVSEQSPIEISHQYEVIRIP 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02578 995 Gene3D - 518 602 IPR013780 -
Vivi2g02578 995 Pfam Domain of unknown function (DUF5110) 626 695 IPR033403 -
Vivi2g02578 995 Gene3D glycosyl hydrolase (family 31) 44 176 - -
Vivi2g02578 995 Pfam Glycosyl hydrolases family 31 180 609 IPR000322 GO:0004553|GO:0005975
Vivi2g02578 995 CDD GH31_N 81 193 - -
Vivi2g02578 995 CDD GH31_glucosidase_II_MalA 193 533 - -
Vivi2g02578 995 SUPERFAMILY Galactose mutarotase-like 80 160 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vivi2g02578 995 SUPERFAMILY (Trans)glycosidases 190 533 IPR017853 -
Vivi2g02578 995 ProSitePatterns Glycosyl hydrolases family 31 active site. 344 351 IPR030458 -
Vivi2g02578 995 PANTHER ALPHA-GLUCOSIDASE 84 679 - -
Vivi2g02578 995 Gene3D Glycosidases 196 517 - -
Vivi2g02578 995 Pfam Galactose mutarotase-like 90 155 IPR025887 -
Vivi2g02578 995 Gene3D - 606 746 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02578 Vivi-Chr2 116945417 116980677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02578 9 995 Glycoside Hydrolase AT3G23640 72.138 0.0 1522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02578 - - gmx:100809690 1768.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02578 2 116945417 116980677 Vivi2g02578 2 116945417 116980677 ECH