Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02556 ATGGGGGAGAACCCCGGGAGTGGGAGCGCGTATGTTGCAGTAGGTGAATCGGCTTCCCCGAAGGCAACAAATCATCTGAGGAAAGTTTCAGTTGTGCCTCTTGTGTTTCTCATCTTCTATGAGGTATCTGGAGGACCTTTTGGTGTTGAGGATACTGTGAAAGCAGCTGGTCCTTTGTTAGCTTTACTTGGATTTTTGGTTTTTCCGTTCATATGGAGTGTTCCGGAAGCTTTGATTACGGCTGAAATGGGTACTATGTTTCCTGAAAATAGTGGTTACGTTGTTTGGGTTTCGACTGCTTTGGGTCCTTTTTGGGGGTTTCAGCAGGGTTGGATGAAGTGGCTTAGTGGTGTGATTGACAATGCTTTGTATCCTGTTTTGTTTCTTGATTATCTGAAGTCTGCGATTCCGGTTATAGGTGATGGTTTGCCTAGAGTTTTCGCGACGTGGGGTTTGACTGTGGTTCTCACTTACTTGAACTATAGGGGTTTGACCATTGTTGGGTTTGCTGCTGTTTGTTTAGGGATTTTCTCGCTGCTTCCTTTTGTTGTCATGGGGTTTATGTCGATTCCGGAAATGAAACCTGCGAGATGGTTTGAGGCAAATCTGGATGATGTTAATTGGAATTTGTATTTGAATACACTATTTTGGAATCTCAATTATTGGGACTCTATAAGCACTCTTGCTGGTGAAGTTGAAAATCCAAAGAAAACACTTCCGAAAGGTTTGTTTTTCGCGTTGATTCTGGTTGTTGTGGCGTACTTCTTTCCGCTTTTGATTGGTACAGGCGCTCTTCCTGTTCAGCGTGAGTTATGGACTGACGGTTACTTCTCGGAAATTGCTATGGTCATCGGAGGAGTGTGGTTGAGATGGTGGCTTCAAGCTGCAGCTGCAATGTCAAACATGGGAATGTTTGTTGCTGAAATGAGCAGTGACTCCTTCCAGCTTCTAGGAATGGCTGAGAGAGGAATGTTGCCGGAGTTTTTCACCAAGAGGTCACGCCACGGAACGCCTCTTGCAGGAATACTTTTTTCAGCCTCTGGTGTACTTTTACTATCATGGCTGAGTTTTCAAGAAATTGTAGCTGCAGAAAACTTCCTGTACTGTATTGGTATGATTCTAGAGTTTACTGCATTCATATTGTTGAAGATCAAACACCCGAATGCACCCCGGCCTTACAAAGTACCAGGCGGAACGGCGGGAGCAATTGTTATGTGCATCCCTCCTACAGTATTGATCTGCGTGGTATTAGCTTTTTCAACCCTCAAAGTATTGGTTGTAAGCCTAATTGCTATGTCGGTTGGCCTTGTGATGCAGCCCTGTCTGAAATATATGGAGAAAAAGAGATGGATGAAGTTCTCACATAGTTCTGAGCTACCTGATATCGTCAACGGAGAGCATAATCACTCTCTGTTGGGATAG 1422 0.443 MGENPGSGSAYVAVGESASPKATNHLRKVSVVPLVFLIFYEVSGGPFGVEDTVKAAGPLLALLGFLVFPFIWSVPEALITAEMGTMFPENSGYVVWVSTALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAIPVIGDGLPRVFATWGLTVVLTYLNYRGLTIVGFAAVCLGIFSLLPFVVMGFMSIPEMKPARWFEANLDDVNWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPKGLFFALILVVVAYFFPLLIGTGALPVQRELWTDGYFSEIAMVIGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFTKRSRHGTPLAGILFSASGVLLLSWLSFQEIVAAENFLYCIGMILEFTAFILLKIKHPNAPRPYKVPGGTAGAIVMCIPPTVLICVVLAFSTLKVLVVSLIAMSVGLVMQPCLKYMEKKRWMKFSHSSELPDIVNGEHNHSLLG 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02556 473 Pfam Amino acid permease 43 419 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vivi2g02556 473 PIRSF AA_transporter 12 470 - -
Vivi2g02556 473 Gene3D Amino acid/polyamine transporter I 25 459 - -
Vivi2g02556 473 PANTHER POLYAMINE TRANSPORTER PUT1 18 465 IPR044566 GO:0022857
Vivi2g02556 473 FunFam Amino acid permease, putative 25 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02556 Vivi-Chr2 116437576 116439920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02556 1 470 Organic Solute Cotransporters AT1G31830 70.675 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02556 - - gmx:100816567 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02556 2 116437576 116439920 Vivi2g02556 2 116437576 116439920 ECH