Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02479 ATGGATCATAATAGAGAAGATGGTTGGAGGGATTTGGTGAAGAATATGCTTCCTCCTGGTGCTTCTGTTCCTGATGATGCTTCTAGTCTTGATTACTCTAGAGCTTTGGAATATTTAGGTCCGCCGGTTTCTTATGAAGTACCGATAGTTGAGCCACTAGGTGTGAAATCAAGAGCAATAGAACAGATTCCTCTGCCGATGTCTCGTATTGTCGGTGTAACAGGCTCTCCTAATCATAGTCCAAGGGTGTCGGGAAGTTCAGAATCCGTGGTTTCTGTGTTACTAAACCCTGATCTTTCTTCTGGTTCGCCTTCTGCTTCACCTGCTTCGGTTCATAATCCTTCAAATGTTGTTACTAAGACGGCGATTAACGAAGCAAAGAGGGCGCCCGTTGTTACTTTTAATACCGTTGAAAGGTCTCAAATGAAAGAGGTGGCGGAGGTAGTGAAGCCGGTGTATCCGGAATACGTTGGAGTTGTGAAAGAAAAGAACAAAAAGAAAATTAGAGTTTGTTATAGGTGCGGAAAAGGGAAGTGGGAAACTAAAGAGTCTTGCATAGTTTGTAATGCAAAGTATTGCAGTAACTGTGTGCTTAGGGCAATGGGATCGATGCCCGAGGGGCGAAAATGTGTAACATGCATTGGCCAGCCTATAGACGAATTGAAGCGTCTGAAATTAGGTAAATATTCGAGGGTGTTGTCCCGGCTGTTGAGTCCTCTTGAAGTCAAGCAAATTATGAAAGCTGAGAAAGAATGTTCTGCGAATCAGCTTCAGCCGGAGCAGTTGAGTATCAATGGGTTGCCCTTGAAGCCTGACGAGATGGCGGAATTACTTGGATGTCCCTTACCTCCGCGTAAGCTGAAGCCTGGTAGATACTGGTACGACAAAGAATCCGGTCTATGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATTAGTTCAAACTTGAATTTCTCTGGCAAACTAAGCACTAATGCTAGTAATGGAAACACCGAAGTTTACATCAATGGTCGAGAAATCACAAAGCTTGAACTGAGGGTACTCAGGTTGGCAAACGTGCAGTGTCCACGTGATACTCATTTTTGGGTTTATGACGATGGTCGTTACGAGGAGGAAGGTCAAAAGAATATAAGAGGAAACATTTGGGAGAAGGCATCAACAAGATTTGTTTGTGCCTTGTTCTCTCTACCCTTTCCACATGGGCAACATCATGGTTCAAGAGATGAGACTAGTAATTATACCGCAGTTCCTAAATATCTGGAACAGAAAAAAACTCAGAAGCTTCTTCTTCTTGGAATTCAAGGATCTGGAACTAGCACTATGTTTAAGCAGGCCAAATTTTTATATGGGAACACGTTTACTGAACAAGAGCTAGAGGATGTTAAACTGATGATACAGAGTAACATGTACAAATATCTTAGCATTTTACTTGATGGAAGAGAGCGTTTTGAAGAGGAGGTTGTTTCTAGATTGAATGGACAAGGTTCTCCTCGTCAAATTACGGAACCCGGTAGCAATGGTGAAGCTAGCACTGCTAGTGAATGCATCTATTCTCTCAACCCAAGGCTAAAGCATTTTTCCGACTGGCTCCTGGACATTATAGCCACCGGGGATTTAGATGCATTCTTCCCTGCAGCGACACGTGAATATGCACCTTTAGTTGAAGAAGTGTGGAAAGATCCAGCGATACAAGAAACCTTCAAAAGAAAAGACGAGCTTCACTTCCTTCCAGATGTTGCGGAGTACTTCTTAAGCCGGGCTGTTGAGATATCTAGCAATGAGTATGAACCTTCTGAAAGGGACATACTATATGCAGAAGGGGTTACTCAAGGAAATGGTTTGGCTTTTATGGAATTCTCACTCGATGATCGTAGCCCAAAGTACGAAGCTTATACAGATAACCCGGATGGTCAAATGCAACCTCAGACCAAGTACCAACTCATAAGGGTGAATGCCAAAGGCATGAGCGAAAGTTGCAAGTGGGTTGAAATGTTCGAAGATGTTAGAGCCGTCGTCTTTTGCGTTTCCCTAAGTGACTACGATCAGTTATCTCTTGCACCAGACAGCAGCGGCAATGGAACACTTCTCCAAAACAAGATGATTCAAAGCAAGGAGCTTTTCGAAACAATGGTGAGACACCCTTGTTTCAAAGACACCCCTTTAATACTAGTTCTTAACAAATACGACGTCTTCGAGGAAAAAATGAAAAGGGTGTCCCTAAACGCCTGCGAATGGTTCAACGACTTTTGTCCCGTGCGCGCGCACGACAGTAACCAATCACTCGCCCACCAAGCTTACTTCTACGTCGCCATGAAATTCAAAGACCTCTACGCGTCCATCACAGGAAGAAAACTTTTCGTCGCACAAGTAAGGGCGAGAGACAGAATAACAGTTGACGAAGCATTCAAGTACATAAAAGAGGTTCTCAAATGGGATGAAGAGAAAGATGAAAATTACTATGGACCACCCGAGGATTCAATTACAGACATGAGTTCTTCTTTTTATGTTAGACAGGAGTAA 2520 0.4333 MDHNREDGWRDLVKNMLPPGASVPDDASSLDYSRALEYLGPPVSYEVPIVEPLGVKSRAIEQIPLPMSRIVGVTGSPNHSPRVSGSSESVVSVLLNPDLSSGSPSASPASVHNPSNVVTKTAINEAKRAPVVTFNTVERSQMKEVAEVVKPVYPEYVGVVKEKNKKKIRVCYRCGKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDELKRLKLGKYSRVLSRLLSPLEVKQIMKAEKECSANQLQPEQLSINGLPLKPDEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFSGKLSTNASNGNTEVYINGREITKLELRVLRLANVQCPRDTHFWVYDDGRYEEEGQKNIRGNIWEKASTRFVCALFSLPFPHGQHHGSRDETSNYTAVPKYLEQKKTQKLLLLGIQGSGTSTMFKQAKFLYGNTFTEQELEDVKLMIQSNMYKYLSILLDGRERFEEEVVSRLNGQGSPRQITEPGSNGEASTASECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDILYAEGVTQGNGLAFMEFSLDDRSPKYEAYTDNPDGQMQPQTKYQLIRVNAKGMSESCKWVEMFEDVRAVVFCVSLSDYDQLSLAPDSSGNGTLLQNKMIQSKELFETMVRHPCFKDTPLILVLNKYDVFEEKMKRVSLNACEWFNDFCPVRAHDSNQSLAHQAYFYVAMKFKDLYASITGRKLFVAQVRARDRITVDEAFKYIKEVLKWDEEKDENYYGPPEDSITDMSSSFYVRQE 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02479 839 ProSiteProfiles G-alpha domain profile. 424 820 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi2g02479 839 MobiDBLite consensus disorder prediction 816 839 - -
Vivi2g02479 839 FunFam Extra-large guanine nucleotide-binding protein 3 454 606 - -
Vivi2g02479 839 Pfam G-protein alpha subunit 421 808 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi2g02479 839 MobiDBLite consensus disorder prediction 825 839 - -
Vivi2g02479 839 Gene3D - 623 818 IPR027417 -
Vivi2g02479 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 423 811 IPR027417 -
Vivi2g02479 839 SUPERFAMILY Transducin (alpha subunit), insertion domain 453 605 IPR011025 GO:0007165
Vivi2g02479 839 SUPERFAMILY FYVE/PHD zinc finger 157 214 IPR011011 -
Vivi2g02479 839 FunFam Extra-large guanine nucleotide-binding protein 3 620 818 - -
Vivi2g02479 839 PRINTS Alpha G protein (transducin) signature 427 442 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi2g02479 839 PRINTS Alpha G protein (transducin) signature 668 696 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi2g02479 839 PRINTS Alpha G protein (transducin) signature 721 730 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi2g02479 839 PRINTS Alpha G protein (transducin) signature 595 617 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi2g02479 839 CDD G-alpha 426 812 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi2g02479 839 SMART galpha_1 414 806 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vivi2g02479 839 Gene3D - 454 606 IPR011025 GO:0007165
Vivi2g02479 839 Coils Coil 837 839 - -
Vivi2g02479 839 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 201 812 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02479 Vivi-Chr2 113842502 113848148 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02479 - - cam:101505955 1508.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02479 2 113842502 113848148 Vivi2g02479 2 113842502 113848148 ECH