Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02423 ATGGAAGACAAATCCCCAAAGGCATTGGGTGGAGCTGCACTTAATCTGAAGAGAAAGCAATCCACCCAAAGTGTTACACGTATGACTGAAGTTCCAACAACAACAAATTTGGTTGTCAAACAAATGAGATTAGTTGGAGATGATAGCCGACCAACTGGCTCTGGTCCTGGTATTTCAAAGTTCTTGGTTAAGTATTTTTTGAACTATAAGAAAAGTGGGTTGCCAAAACGTTTGATGTTCTATAAAAATGGTGAGTGGTCAGACTATCCTGAGGATGTTGTTAACTTGGTTAGGAAAGATTTTGAAATCAAGAAGGCAGCTGTGGAGATAGAATTTGATGGTCAAAATATTGTTCTAGACTTTTTGCATATGTATAATGTTAATTTACAAACAGGTTTGCAACAACCCATTGCTTGGATTGATGAGGCCGAGAGTTGCTTTTTCCCTGAACTTTTTGATGGTTCCGATGATGAACCTTATAACCAAGACATAGAAATAGATTTAGATGCTTATATTGAACCTGTATATGGAAGACAGGATGTAGATTCTGTAAGAAAATTGTTTCTCACGGGAATGGATACTTTCGGCATTAGCGAGGGTGATATCGTGGATGTTTACCGTAGCTCGGGCATCTCAATGCAAGCGCGACTAGAGTTATTCCAGAAGCAAGCTGATATCACAAAAGGAATTCATGGTGATGCTAATGTTCGATACGGTTGGCTTGCATGTTCTAAAGAGGAACTGACTACAATGATGGAATATGGGCTTGGTCACAATGCACTATCATCATGCAAGTGCATATATGGATTTGGTGTTCATCTTGCTACTATTACCCACCCTTATGTCTGTGCTCCTTATTGTGATGTTGACGAAAATGGAGTTAGGCACATGGTCCTTTGTCGTGTAATAATGGGGAACATGGAGCCTCTTCATCGTGGCAATAATAAGATTCGTCCTAGTGGTTTCAAATATGATAACGGGGTTGATGACATTCAACACCCAAAATACTTTGTGGTTTGGAATATGAATATGAAAACTCATATCTATCCAGAATTTGTTGTCAGCTTCAAGGCACCTTTGGACGCAGAAGCTTGTTTAAAAGAGAGTGAGAAAAATGTTTCTGGGAATAACTATTCTACCTTGGATACTGAAAAGAAGATTTCACATGATGATTTTGTGATGAAGCTGCGATTAATTGTAGGAGACGATATACTGAGATCTGTAGTAACTAATCTTCGAGACAAGGGACCATCAAATGATGATCTAGACGATGTAACTGAGAATTTTAAATAA 1293 0.3852 MEDKSPKALGGAALNLKRKQSTQSVTRMTEVPTTTNLVVKQMRLVGDDSRPTGSGPGISKFLVKYFLNYKKSGLPKRLMFYKNGEWSDYPEDVVNLVRKDFEIKKAAVEIEFDGQNIVLDFLHMYNVNLQTGLQQPIAWIDEAESCFFPELFDGSDDEPYNQDIEIDLDAYIEPVYGRQDVDSVRKLFLTGMDTFGISEGDIVDVYRSSGISMQARLELFQKQADITKGIHGDANVRYGWLACSKEELTTMMEYGLGHNALSSCKCIYGFGVHLATITHPYVCAPYCDVDENGVRHMVLCRVIMGNMEPLHRGNNKIRPSGFKYDNGVDDIQHPKYFVVWNMNMKTHIYPEFVVSFKAPLDAEACLKESEKNVSGNNYSTLDTEKKISHDDFVMKLRLIVGDDILRSVVTNLRDKGPSNDDLDDVTENFK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02423 430 Gene3D - 176 358 - -
Vivi2g02423 430 ProSiteProfiles PARP catalytic domain profile. 154 375 IPR012317 GO:0003950
Vivi2g02423 430 Pfam RCD1-SRO-TAF4 (RST) plant domain 383 413 IPR022003 -
Vivi2g02423 430 ProSiteProfiles WWE domain profile. 64 139 IPR004170 -
Vivi2g02423 430 SUPERFAMILY ADP-ribosylation 181 363 - -
Vivi2g02423 430 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 58 415 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02423 Vivi-Chr2 111250691 111253453 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02423 - - vvo:131649798 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02423 2 111250691 111253453 Vivi2g02423 2 111250691 111253453 ECH