Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02416 ATGTCGATAAAGACTGTTAGAGTCAGTAACGTTTCCTTGGGAGCAACCGAGCGGGACCTTCAGGAGTTCTTTTCTTTTTCTGGTGACATTGATTATGTTGAACTACGGGGTCACGATGAACGATCTCAAACTGCTTATGTTACTTTCAAGGATTCACAGGGGGCTGAAACTGCAGTATTGCTATCGGGAGCAACAATAGTTGACCTGTCGGTTACAATTACTCTGGATCCAGATTACCAGCTTCCACCTGGTGCTTTGGTTTCATCTGTAAATGAAAATCAAACTCCTGGTGGTGCTGAATCTGCCTTGCGGAAGGCAGAGGATGTAGTCTCCAGCATGGTAGCCAAAGGCTTTGTCTTAGGAAAAGATGCTGTCAACAAAGCTAAGACTTTTGATGAGAAGCTCCAGTTATCATCAACGGCCTCGGCAACAGTTGCATCTTTTGACCAAAAACTTGGGCTTAGTGAGAAAATAGGCGCTGGTGCTACAGTTGTGAGTGATAAAGTTCGAGAAGTGGATCAAAAGTTTCTGGTTTCGGAAAAGACAAAATCAGCATTTACAGCTGCAGAACAGACAGTCAGTAGTGCTGGTTCTGCCATAATGAAGAATCGCTACATACTTACTGGGGCTACTTGGGTAACAGGTGCTTTTAGTAGGGTTTCTAAGGCAGCTGTGGAAGTAGGTCAGAAAACAAAAGAGAAAATGGAGAATGCAGAACAACAAGAGAAGAAACAGGTTGATGACGATCAGTATGCACATGTCCAGCCCCCAAAAGCAGCAGCTGCAAGTGAGCCGAAGTCTGGTCCTGCTCCTGCTCAGGGTCTGATCCTTTGA 834 0.4508 MSIKTVRVSNVSLGATERDLQEFFSFSGDIDYVELRGHDERSQTAYVTFKDSQGAETAVLLSGATIVDLSVTITLDPDYQLPPGALVSSVNENQTPGGAESALRKAEDVVSSMVAKGFVLGKDAVNKAKTFDEKLQLSSTASATVASFDQKLGLSEKIGAGATVVSDKVREVDQKFLVSEKTKSAFTAAEQTVSSAGSAIMKNRYILTGATWVTGAFSRVSKAAVEVGQKTKEKMENAEQQEKKQVDDDQYAHVQPPKAAAASEPKSGPAPAQGLIL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02416 277 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 242 - -
Vivi2g02416 277 SMART rrm1_1 5 74 IPR000504 GO:0003723
Vivi2g02416 277 FunFam RNA recognition motif-containing protein 1 74 - -
Vivi2g02416 277 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Vivi2g02416 277 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Vivi2g02416 277 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 66 IPR000504 GO:0003723
Vivi2g02416 277 Gene3D - 2 74 IPR012677 -
Vivi2g02416 277 MobiDBLite consensus disorder prediction 231 277 - -
Vivi2g02416 277 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02416 Vivi-Chr2 111098753 111103278 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02416 - - gmx:100809613 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02416 2 111098753 111103278 Vivi2g02416 2 111098753 111103278 ECH