Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02368 ATGTCTTGCTCAAGTTCTCCTTCTAGAGCGAGTTCACTTTCGGAATCACTCGAAGTCGATCGAGTGAATCCTATGTTGACTGATCTTGGCGGAGGTTCCGTTCGGTCCCGTGTTCCGGTTAACTCTTCTGATGAACAGGCAACGCAAGACAAAATTATGGCGGCACTTTTCAATATCCTACCCGAGGAGGAGGATCTTGATCAGCCAGCCTCTTATGAGATATACAACGGCGATTCGGAATTTATTTTGCCGGAGGACTTGGATCCTGACTGTCAACCTCTCAATTCGGCCTCGCCTGCTGATGATTTGCTGCCGGAACCATGGTTTTCCGAGGATGCTCTCGATGATAGCTGGTCGTATGATGATGAACCGTCAAAGGATGACGTTTATGACTCTGATTCTAAAGCTGCACCGTCGATGATTGGAGCTGGGCTGGCCAACCTTGGGAACACTTGCTTTCTGAACTCGATTACGCAATGCTTCACGCATACAGTGCCTCTAGTTGAGGGTCTTCTTTCGTGCAACCATTCTACTGATGGTCATAATGGGTACTGCGTCATTTGTGCTTTCCGCTACCAGATGCAACATTCCTTGCAGTCTACTGGAACTGTTATCTCACCTGTGATACTTGTGGATAATTTGAAGCATTTTTCTTCTATGTTTAGAAGACATCAACAAGAGGATGCACACGAATTTATGCAGTGTGCATTGGATAAACTCGATTCATGTTTTTTAAGCTTGAAGAAGAATGATCCAAGTTTTGAGGGTGAGAATATTGTGAACAAAGTTTTTGGAGGAAGTCTGGTCAGCAAGCTCCGATGTTGTACCTGTGGCCGCTCCTCTGACACTAAGGAACCATTGATTGACTTGAGTTTAGAAATAGACAATGTAGATTCTTTGTCAAGTGCTTTAGAATCTTTCACTATGGTGGAAAACATTGATGAAAAGCTTAAATGTGAGGGCTGCAATGAAGAAGTTTCTATGGAGAAACAGCTTATGTTGAATCAGACCCCTTCTATTGCTGCATTTCATTTAAAGAGGTTTAAGACAGATGGGATTTTTGTTGAAAAGATTGACAAGCATATCGATTTCCCTTTGGAGCTGGACTTGCAGCCTTACACCATTTTGAATGAAAACAATAATGTACCATTGAAATATGATCTATATGCAGTTGTTGTGCATATTGGATATTCATCTAACTCGGGGCATTATTTCTGCTTTGTTCGCACTGCTCCAGACACATGGCATAAGTTGGATGATTCAAAGGTTACCAAGGTATCAGAAAAGACTGTGCTGTCTCAGGAAGCATACATATTGTTTTATGCACAGCAAAATACTCCTTGGTTTTCAGAGTTTGCAGAATCTACAATTCCATCCCTGGATTTTAGTACGATGAATACATCTCCCAAGTCTGTTTTAGACATCACTGATGGCCAGGATAAGTCATCTCCTGTTTCAAATGAAAATGTTGAAGTGAATGAGGCTGAGGACTCCAAAAATTTTTCTGAAAAGAAGTTGGATTATTCTAGTCGGCAATGTCGTGAGTTGCTTAAAATTGATGACATCGTTGATGCTTCTCCTCGCCGTGAACAAATTCCTGCTGGACCATCAAATCAGAAAACTCTTAATGTGAAAAGATTGGAAGATATCACCTCCAAAGCACTGCCTCTGAATAGTGTCAGCTTGACTAGTACTGCAAAGGCTGGTGGGAGTTCATATGTTGATAAAAGTGCTCATAAAAACAAATCTAGTCAGAGTGTTCTAGATTTGGAAGAGGATGATATTTTCAATTCTATTACTCCTCCCAACACACCCCCTTCTCAGACTCCAGGTAAGAGTTTCCAGATCTCACGCGATCACGTGAAGACAGAGAATCAAGGGAGCAGTAAAAAATCATCATCAAGTAAGTCAAATAAGTCATCCAATAGTCCTGGAAAAAAAGAGGCTATCTCTTATCTTAGGAAGATGCCTGGTTCAAGGAGAGGTGTATTTATGGGCTTACTTAATGCTAGTCAAAACAAGACTTCCCCAGATAACAAGAGAAAACACACTGATTCATCGCTGTCTGACAAAGGAAACAACAGCGCTCGCAAGAAATCAAGCCATGCTTCTGATGGCGGCTACTCTGCGGCAGCTAGAGTTTCACAATAA 2151 0.4184 MSCSSSPSRASSLSESLEVDRVNPMLTDLGGGSVRSRVPVNSSDEQATQDKIMAALFNILPEEEDLDQPASYEIYNGDSEFILPEDLDPDCQPLNSASPADDLLPEPWFSEDALDDSWSYDDEPSKDDVYDSDSKAAPSMIGAGLANLGNTCFLNSITQCFTHTVPLVEGLLSCNHSTDGHNGYCVICAFRYQMQHSLQSTGTVISPVILVDNLKHFSSMFRRHQQEDAHEFMQCALDKLDSCFLSLKKNDPSFEGENIVNKVFGGSLVSKLRCCTCGRSSDTKEPLIDLSLEIDNVDSLSSALESFTMVENIDEKLKCEGCNEEVSMEKQLMLNQTPSIAAFHLKRFKTDGIFVEKIDKHIDFPLELDLQPYTILNENNNVPLKYDLYAVVVHIGYSSNSGHYFCFVRTAPDTWHKLDDSKVTKVSEKTVLSQEAYILFYAQQNTPWFSEFAESTIPSLDFSTMNTSPKSVLDITDGQDKSSPVSNENVEVNEAEDSKNFSEKKLDYSSRQCRELLKIDDIVDASPRREQIPAGPSNQKTLNVKRLEDITSKALPLNSVSLTSTAKAGGSSYVDKSAHKNKSSQSVLDLEEDDIFNSITPPNTPPSQTPGKSFQISRDHVKTENQGSSKKSSSSKSNKSSNSPGKKEAISYLRKMPGSRRGVFMGLLNASQNKTSPDNKRKHTDSSLSDKGNNSARKKSSHASDGGYSAAARVSQ 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02368 716 MobiDBLite consensus disorder prediction 114 133 - -
Vivi2g02368 716 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 143 444 IPR028889 -
Vivi2g02368 716 Gene3D Cysteine proteinases 141 450 - -
Vivi2g02368 716 FunFam Ubiquitin carboxyl-terminal hydrolase 20 139 447 - -
Vivi2g02368 716 MobiDBLite consensus disorder prediction 1 46 - -
Vivi2g02368 716 MobiDBLite consensus disorder prediction 471 503 - -
Vivi2g02368 716 Pfam Ubiquitin carboxyl-terminal hydrolase 144 441 IPR001394 GO:0004843|GO:0016579
Vivi2g02368 716 MobiDBLite consensus disorder prediction 661 716 - -
Vivi2g02368 716 MobiDBLite consensus disorder prediction 471 491 - -
Vivi2g02368 716 SUPERFAMILY Cysteine proteinases 143 443 IPR038765 -
Vivi2g02368 716 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 386 404 IPR018200 GO:0004843|GO:0006511
Vivi2g02368 716 MobiDBLite consensus disorder prediction 1 18 - -
Vivi2g02368 716 MobiDBLite consensus disorder prediction 119 133 - -
Vivi2g02368 716 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 92 445 - -
Vivi2g02368 716 MobiDBLite consensus disorder prediction 565 584 - -
Vivi2g02368 716 MobiDBLite consensus disorder prediction 565 648 - -
Vivi2g02368 716 MobiDBLite consensus disorder prediction 627 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02368 Vivi-Chr2 109568059 109572008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02368 138 443 Miscellaneous Gene Families AT4G31670 34.810 1.49e-50 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02368 K11855 - gmx:100808015 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02368 2 109568059 109572008 Vivi2g02368 2 109568059 109572008 ECH