Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g02089 ATGGAGGTTAGATCAGAGGGTATACGTTTGAGGTTTTGGTTTGTTCGTTTGTGTTCAAGCATTGTGCTTTGGATTTGTTTGGTTCAATTAGTGACAGTGAGTGAACTATGGCATTCGCATTTGATTTCTGGGATTACTAGTGGTATATATAACATTGCTCAAATTCAGCTTCCCAAACAACAGGTTAATGGCGTTGATCATTTGCCTCCTGTTTTTCTTCCTCCAAGAAATTATACAAGTAATGGCTTTCTAAGAGTTTCATGCAATGGTGGCTTGAATCAAATGCGTGCTGCGATATGTGACATGGTGACAATTGCTCGATTGTTGAATCTCACATTGGTCGTGCCAGAGCTTGATAAGACATCGTTTTGGGCAGACCCTAGTAATTTTGAAGACATTTTTGATGTGAAGCATTTCATTAATTCTTTGAGAGATCAAGTTCGAATAGTGAAAAGAGTTCCTAAAAAGTTTAGTAGTAAATATGGATATACTAGCCTCGAGATGCCTCCTGTTAGCTGGTCGAATGAAAAATATTACTTGGAACAGATTCTGCCACTTTTTAGAAAGCATAAGGTGTTACACTTCAACAAAACGGATACACGTCTAGCTAATAACGGTCTCCCACTTGTTCTTCAGAAACTCAGGTGCCGTGTCAACTACCAGGCAATTAAATTCACTTCTCAAATTGAGAATTTGGGGCACAGATTGATTCAGATGCTTCATGAAAAGGGACCTTTTGTGGCATTGCATCTTAGATACGAGATGGATATGTTGGCTTTCTCGGGTTGTACTCAGGGCTGCATGGATAAAGAAGCCGAGGAGCTCAAAAGAATGAGGTATGCATTCCCTTGGTGGAGAGAAAAGGAGATAATTTCTGAAGAGAGGAGATCACAGGGTCTATGTCCTTTGACACCAGAGGAGGCGGCCTTAGTTCTTCAAGCCCTAGGTTTCGGTAGGGAGACACAGATTTACATTGCAGCTGGTGAGATTTACGGTGGCGAACGTAGGCTTGCACAACTAAGAGCAGCGTTTCCTAAAATTGTGAAAAAAGAAACGTTGCTAGATCGTGATGATTTACAGTATTTTCAGAATCATTCATCTCAGATGGCAGCCTTGGATTTTATGGTTTCAGTTGCCAGTAACACCTTTATCCCAACCTATGACGGGAACATGGCAAGACTCGTCGAAGGCCATCGTAGGTATTCCAATTTCAGAAAAACGATCCTGTTGGATCGAAAAAAACTCGTGGAACTGGTTGACATGCATCAAAACGGAACACTAAAATGGAACGAATTCGCAGACGGTGTGAAACAGGTTCATGCAAAGAGAACTGTAAGGCCAACTCGGCGTACAGTTATAATCGACAGACCGAAAGAGGAGGACTATTTCTATGCCAACCCTCATGAGTGTCTGTGTGAGGAAACAAATTGTGATGAATTTCTAGGCCATCACAACTCTAGTAGTCAAGTAGCATGA 1476 0.4146 MEVRSEGIRLRFWFVRLCSSIVLWICLVQLVTVSELWHSHLISGITSGIYNIAQIQLPKQQVNGVDHLPPVFLPPRNYTSNGFLRVSCNGGLNQMRAAICDMVTIARLLNLTLVVPELDKTSFWADPSNFEDIFDVKHFINSLRDQVRIVKRVPKKFSSKYGYTSLEMPPVSWSNEKYYLEQILPLFRKHKVLHFNKTDTRLANNGLPLVLQKLRCRVNYQAIKFTSQIENLGHRLIQMLHEKGPFVALHLRYEMDMLAFSGCTQGCMDKEAEELKRMRYAFPWWREKEIISEERRSQGLCPLTPEEAALVLQALGFGRETQIYIAAGEIYGGERRLAQLRAAFPKIVKKETLLDRDDLQYFQNHSSQMAALDFMVSVASNTFIPTYDGNMARLVEGHRRYSNFRKTILLDRKKLVELVDMHQNGTLKWNEFADGVKQVHAKRTVRPTRRTVIIDRPKEEDYFYANPHECLCEETNCDEFLGHHNSSSQVA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g02089 491 PIRSF UCP009360 2 468 IPR024709 -
Vivi2g02089 491 Pfam GDP-fucose protein O-fucosyltransferase 83 401 IPR019378 -
Vivi2g02089 491 FunFam O-fucosyltransferase 28 217 411 - -
Vivi2g02089 491 PANTHER OS02G0726500 PROTEIN-RELATED 11 473 - -
Vivi2g02089 491 CDD O-FucT_plant 83 407 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g02089 Vivi-Chr2 97593427 97596995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g02089 80 486 Miscellaneous Gene Families AT2G37980 47.188 3.32e-134 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g02089 K23280 - gmx:100775903 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02089 2 97593427 97596995 Vivi2g02089 2 97593427 97596995 ECH