Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01960 ATGGATTTTGAGATTTCTGATGAGATGTTAGGGACTTTTGCTCCACTTTTAGTTTATTGGATTTATTCTGGTTTTTATGTTGTTTTGGGGTTGTTTGCGGAGGATTATAGGTTACATACGATACAAGATGAGGATGAAAAGAATTTGGTGTCTAAGTTTGATGTTGTTAAAGGAGTTCTCCTTCAACAAGCTGTTCAAGCTGTGGTTGCAACCCTCTTATTTGCAGTGACAGGAAGTGATACCCAAAGTAGTACCAATGAGAATGCTTCTATTCTTGTTTTAGCAAGACAATTTGTTACTGCTATGTTGGTAATGGACACATGGCAATACTTTATGCACAGATACATGCATCAGAACAAGTTCCTATACAAACACATCCACTCTCTACATCACAGACTCATCGTACCCTATTCGTTCGGAGCTCTTTACAATCACCCCGTTGAGGGTCTTCTTAACGACACAATCGGTGGAGCTTTGTCTTTCCTCCTCTCTGGTATGAGTCCTCGAGCATCCATCTTCTTCTTCTCCTTTGCCACCATTAAAACTGTAGATGATCACTGCGGGTTATGGCTCCCCGGAAACCTGTTCCATATGTTTTTCAATAACAACTCTGCTTACCACGACGTACACCATCAACTCTACGGTAACAAGTACAACTTCTCCCAACCTTTCTTTGTTATGTGGGACAAAATATTGGGTACCTACATGCCATACTCGCTGGAGAAGAGGGCAAGTGGTGGTTTTGAATCTAGACCTTGTAAAGATTTCAAGGCTGAATGA 780 0.4103 MDFEISDEMLGTFAPLLVYWIYSGFYVVLGLFAEDYRLHTIQDEDEKNLVSKFDVVKGVLLQQAVQAVVATLLFAVTGSDTQSSTNENASILVLARQFVTAMLVMDTWQYFMHRYMHQNKFLYKHIHSLHHRLIVPYSFGALYNHPVEGLLNDTIGGALSFLLSGMSPRASIFFFSFATIKTVDDHCGLWLPGNLFHMFFNNNSAYHDVHHQLYGNKYNFSQPFFVMWDKILGTYMPYSLEKRASGGFESRPCKDFKAE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01960 259 PANTHER STEROL DESATURASE 13 237 - -
Vivi2g01960 259 Pfam Fatty acid hydroxylase 98 234 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01960 Vivi-Chr2 92070948 92073869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01960 1 257 Acyl Lipid Metabolism Gene Families AT1G69640 78.988 1.72e-144 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01960 K04713 - gmx:100778076 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01960 2 92070948 92073869 Vivi2g01960 2 92070948 92073869 ECH