Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01866 ATGACTTCAGTTCAAAATATGGCGCATGCGCAAGAGGTCAAACCAAGCACCCCACTTACAAAATGCGACCGCTACTTTGAAACCATACAATCCAGAAAGAAACTACCACAGACATTGCAGGAGACATTGACAGATTCATTTGCAAAGATTCCAGTTTCTTCTTTTCCAGGAGTTCCAGGAGGAAAAGTGATTGAAATTCTATCAGACACACCTGTTGGTGAAGCTGTTAGGATTCTGTCTGAAAGCAATATCTTAGCAGCTCCAGTTAAAGACCCTGATGCAGGAATTGGTTCAGATTGGAGAGGCAGGTACCTTGGCATCATAGATTATTCAGCCATCATTCTCTGGGTGATGGAGAGTGCAGAGCTTGCTGCAGTTGCTCTATCAGCTGGTACAGCAACTGCTGCTGGAGTTGGTGCGGGAACTGTTGGTGCTTTAGGAGCACTAGCATTAGGAGTTACAGGTCCTGCTGCAATTGCTGGACTAACTGCTGCTGCAGTAGGTGCAGCAGTGGCAGGTGGTGTTGCCGCAGATAAATCTGTGGCTAAAGATGCTCCTCAAGCTGCAAATAACCTTGGTGAGGACTTTTACAAAGTAATATTGCAAGAAGAACCCTTCAAGTCCACAACGGTGGGATCAATACTGAGATCATACAGATGGGCACCTTTTGTTCCAGTTGCAAAAAACAGTGCTATGTTGACCGTCTTACTGCTTCTCTCAAAATATCGACTGAGGAATGTACCGGTGATAGAACCTGGTAAGCCAGACGTTATAAACTTTATTACTCAGTCAGCAGTTGTCCAAGGCCTAGAAGGATGCAGAGGAAGAGATTGGTTTGACTGCATTGCAGCTAGGCCTATATCTGATCTGGGACTTCCTTTTATGTCTGCTGATAAGGTTATTAGCGTCCAGAGCAATGAATTGATTCTTGAAGCTTTCAAGATTATGAGGGATCATCAAATTGGTGGTCTTCCTGTTGTAGAGGGGCCAACTAAGACAATTGTTGGAAACTTGAGCATAAGAGACATTAGATACCTGTTGCTAAAGCCTGAAATCTTCTCCAATTTCAGGAACCTCAATGTCATGGATTACATGAAGAAAATTGTCTCAGCATCCCATGAATCTGGAAAAGTCACTCGGCCAATAACATGCAAGCCTGACTCAACTCTGCAGAGCGTGATTCATACTCTTGCTTCACAGTCTATTCACAGGGTTTATACAGTAGATGAACAAGATCATGTAGTTGGTGTCATCACACTGAGAGATGTAATCTCTTGTTTCATCAACGAACCTGACTACCATTTTGATGATTACTACGGATTTGCAGTGAAAGAGATGCTGAATCACTGA 1350 0.4348 MTSVQNMAHAQEVKPSTPLTKCDRYFETIQSRKKLPQTLQETLTDSFAKIPVSSFPGVPGGKVIEILSDTPVGEAVRILSESNILAAPVKDPDAGIGSDWRGRYLGIIDYSAIILWVMESAELAAVALSAGTATAAGVGAGTVGALGALALGVTGPAAIAGLTAAAVGAAVAGGVAADKSVAKDAPQAANNLGEDFYKVILQEEPFKSTTVGSILRSYRWAPFVPVAKNSAMLTVLLLLSKYRLRNVPVIEPGKPDVINFITQSAVVQGLEGCRGRDWFDCIAARPISDLGLPFMSADKVISVQSNELILEAFKIMRDHQIGGLPVVEGPTKTIVGNLSIRDIRYLLLKPEIFSNFRNLNVMDYMKKIVSASHESGKVTRPITCKPDSTLQSVIHTLASQSIHRVYTVDEQDHVVGVITLRDVISCFINEPDYHFDDYYGFAVKEMLNH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01866 449 Pfam CBS domain 298 348 IPR000644 -
Vivi2g01866 449 Pfam CBS domain 379 425 IPR000644 -
Vivi2g01866 449 ProSiteProfiles CBS domain profile. 295 354 IPR000644 -
Vivi2g01866 449 SMART cbs_1 222 271 IPR000644 -
Vivi2g01866 449 SMART cbs_1 62 118 IPR000644 -
Vivi2g01866 449 SMART cbs_1 299 348 IPR000644 -
Vivi2g01866 449 SMART cbs_1 380 428 IPR000644 -
Vivi2g01866 449 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 58 428 - -
Vivi2g01866 449 ProSiteProfiles CBS domain profile. 57 123 IPR000644 -
Vivi2g01866 449 Gene3D - 58 273 IPR046342 -
Vivi2g01866 449 ProSiteProfiles CBS domain profile. 377 433 IPR000644 -
Vivi2g01866 449 SUPERFAMILY CBS-domain pair 283 436 IPR046342 -
Vivi2g01866 449 CDD CBS_pair_SF 298 424 - -
Vivi2g01866 449 Coils Coil 446 449 - -
Vivi2g01866 449 SUPERFAMILY CBS-domain pair 43 268 IPR046342 -
Vivi2g01866 449 Gene3D - 282 430 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01866 Vivi-Chr2 86983443 86985566 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01866 - - gmx:100800376 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01866 2 86983443 86985566 Vivi2g01866 2 86983443 86985566 ECH