Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01779 ATGGAGTTTTTCAACAAATCAAAAGTGATTAAGCTTCGAAGCCATTTAGATAAGTACCTAATAGTCGACGACGACAAAATCAGCAAAATCAAAATCCGCCAGAGCCGAAACGGAGCCGTTAGAAGAGCTCAATGGACGGTTGAAAAAGTAGAGAATCGTCGCGACGCGATACGGTTAAAGAGCTACAACGGAAAATACTTAACGGCAACAGAAATACCGTTTCCGTTAGGGGTGACGGGAAAAACGGTTATAATAACGGAGTTGGAAGAAGGTTTAGTAGATGGAAGAAACGAGTGGGAACCGATACGGGATGGATTTCAGATAAAGTTGAGGAGTTGGTGCGGGAAGTATTTGAAGGGAAACGGCGGAGCGCCGCCGTGGAGGAATAGTGTGACGACGGATGATTGGTTTGGTTCTGGGAAAAAGGAGTGTGTTCTGTGGGATGTGGAAGCGGTGGTGGAAGAGAATATGAGTGAATTGGTTTTTGAGAGATTGTTATCGTCTTTTGCTTCTGATGATGTTTCTTTTGATTCCGATACGGAGTCTCCGATGTCCGTTTTCTCCCTTTCGTCGTCGCCGCCGGCAAGAGAGACTTTTCAGACAACAAAACCCAACAAACTCCGAACTGGAATGGACTTCTTTCACAGAGCAAAAGCAGTCCGTCTCAAAAGCCACCACGACAAATACCTCCTAGCAGAAGAAGATGAAGAATCCGTCACACAACACAGAAACGGTTCCTCAAATAACGCTAAATGGACAGTCGAGTATGTCCCCGATTACGACAACGTCATCCGTCTCAAAAGCTGTTATGGCAAATACCTCACAGCTTCCGACCAGCCGTTCCTCCTCGGCATGACGGGTCGCAAAGTTCTTCAAACACTTCCGAATACGATTGATTCTTCTGTCGAATGGGAGCCCGTTAGAGACGGTGTTCGTGTGAAGCTGAAGACGAGATATGGGAATTTTCTTAGAGGGAATGGTGGGTTGCCACCGTGGAGGAATACTGTGACGCATGATATTCCTCATAGAACTGTTACTCAGGATTGGATTTTGTGGGATGTTGATGTTGTTGAGATTAATGTTAGTAAACATGGTTCGGATCTACCTACCGAAACCAACAACACGCCTTCACCTGCTGTTGTTGTGCCTACTGTTTCTGCAGGCTTTTCTAGACAACAGTCTAATGAATCGAGTGTTGGTGTTTCTCCGAAGACGAAAGAGGGTAGGATGATATACTACCATGTTGCTGAAGATGATGGAGAGGTGAGTGATGAAGGTGTGCAAGGGTATTCTTTGGTTTTCAAAGGGAATGGAGTTGAGGATTTGAGGAAGAAGTTTGAGGAAGAGACAGGGTTAGAGGGAATCATTGTGTGTAATAAGAGTCCTTTGAATGGAAAGCTTTATCCTCTTCACTTGCAGCTTCCTCCAAATAATGTCACTATGCATGTTGTTTTGGTTCTTCCTTTCTCAAAAGTGGCAACAGAGTTGCAGGCACGAGGTTTGCTTTGA 1509 0.45 MEFFNKSKVIKLRSHLDKYLIVDDDKISKIKIRQSRNGAVRRAQWTVEKVENRRDAIRLKSYNGKYLTATEIPFPLGVTGKTVIITELEEGLVDGRNEWEPIRDGFQIKLRSWCGKYLKGNGGAPPWRNSVTTDDWFGSGKKECVLWDVEAVVEENMSELVFERLLSSFASDDVSFDSDTESPMSVFSLSSSPPARETFQTTKPNKLRTGMDFFHRAKAVRLKSHHDKYLLAEEDEESVTQHRNGSSNNAKWTVEYVPDYDNVIRLKSCYGKYLTASDQPFLLGMTGRKVLQTLPNTIDSSVEWEPVRDGVRVKLKTRYGNFLRGNGGLPPWRNTVTHDIPHRTVTQDWILWDVDVVEINVSKHGSDLPTETNNTPSPAVVVPTVSAGFSRQQSNESSVGVSPKTKEGRMIYYHVAEDDGEVSDEGVQGYSLVFKGNGVEDLRKKFEEETGLEGIIVCNKSPLNGKLYPLHLQLPPNNVTMHVVLVLPFSKVATELQARGLL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01779 502 FunFam BnaC05g19630D protein 215 355 - -
Vivi2g01779 502 Pfam Domain of unknown function (DUF569) 1 147 IPR007679 -
Vivi2g01779 502 Pfam Domain of unknown function (DUF569) 211 352 IPR007679 -
Vivi2g01779 502 SUPERFAMILY Actin-crosslinking proteins 215 357 IPR008999 -
Vivi2g01779 502 Gene3D - 219 337 - -
Vivi2g01779 502 Gene3D - 9 137 - -
Vivi2g01779 502 SUPERFAMILY Actin-crosslinking proteins 5 136 IPR008999 -
Vivi2g01779 502 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 211 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01779 Vivi-Chr2 81923546 81929088 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01779 - - gmx:100797561 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01779 2 81923546 81929088 Vivi2g01779 2 81923546 81929088 ECH