Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01739 ATGTCCTCAAGACGCCACTCGCTGAGTGGTCCTCCTCCTCAACTCAGTGGTACCGCTTCGACTCACGAGCTCCGGCAACGAGTCATTACCTGTCTCAACAAACTCTCCGACCGAGATACTCTCGCCGGTGCTAGTTTGGAGCTTGAATCCATTGCCAGAACCCTAAGTCATGACTCGTTTTCATCTTTTCTCTCTTGCATTCACAACACCGATTCGTCGTCTAAATCTCCGGTTCGTAAACAATGTGTTAACCTTTTGAGCCTTCTCTCGCGTTTCCATGGAGACGCTCTCTCTCCTTTTATCTCGAAGATGATTGCTACTGTTCTCCGTCGTCTGAGAGATCCAGACTCGGTTGTACGATCCGCTTGCGTCGACGCTGTTGCTGAGATGTCGTCGCGCATAACTCGGCCTTCGTTCTCTGTCGCGTTCCTGAGGCCGTTTATGGATGCATTAGCGCTGGAGCAGGACGTGAATGTGCAGATCGGCGCCTCACTGTGCCTTGCCGCGGCTATTGATGCGGCGCCGGAGCCGGATGTTGAGTCGCTCCGGAGGACTACGCTTCCGAGGTTAGGGAAGCTTCTGAAGACTGACTCGTGTAAGGCGAAGGCGCCGTTGTTGGTGCTGATCGGAAGCGTTGTCTCCGTCGGCGGTGCTTCGAGTCGTGGAGTAATGAATTGGTTAGTTCCTTGCGTTGTTGAGTTTCTCGGAAGTGAGGATTGGAATGTGAGAAAAGCCTCTGTGGAAGTGTTGGGGAAAGTAGCTTCAGTGGAGAAAGATTTGGCTTCGCAGCATAAAGTTCTGTGTTTAGATTCGTTGCAAAATAAACGGTTTGATAAGGTCAAAGTTGTTCGAGAGACTATGAATCTGGCATTGGATATGTGGAAGGAAGTAAAAGATGTGTCTGAAAATGCTCCTACTCCGGTTAAGTCTCCATGTGTTTCAGTTGGCACAGAAGATGGTAAAGGTCTGTATGCTGCCAAAAGTTCACCCTCTGTTGGCTCTAAATTGTCCCAACTAAATAAAATGGTCCCTTCAAAAAGGTCACCTCCATCTACAGTTTCATTTAAATCGTCTGGCAAAAGAGAGATTCCTATAAAGGGTAATGATAAGTATTCAAGGATGGGGGCGTTGCGCCAGCAAGATCACGAAAAGTTATCTGTTGAAAACCTTCAAACTCCAATATCAAAGTCCTCCCATTCAAACATGACCAAGGAAGAAGATATTAAAAGGTGTGATTTTGAATCTTCTAAGTCACCCACGTATCAGAATGTGACAAATTCGAAGGCGGATGTAAAGCAGGTTTTCCTTAACAAGATGTCAGATGAGAAAGTGCGGAAGATTGGTGGTTCAAATTCTCGCGTAGTTCCATGTGATGATGATGACGATCTCAACACAGTTGTTACTGTCAATAATGTAAATGAAGTTTGTGAGAGCCCACAAGATGTTGAGGATTTGTCTTTGATACGCGAACAACTTTTACAAATTGAAAACCAGCAATCAAATCTGTTAGACCTCCTCCAGAGATTTATTGGAACCTCCCAAACTGGGATGAATTCTCTGGAGACACGTGTACATGGTCTAGAGATGGCATTGGATGAAATATCATATGATTTGGCAGTATCAAGTGGCAGGATTCCCAACACTGATGCCATAGAAGACATGTGTTGCAAGCTACCTGGCACTGACTTTCTGAGTTCTAAATTCTGGAAGAAGACAGAAGGTCGGTATTCGACGACGTCAAGGCTCTCTTTTGGAAGCTCAGCACCAATAAATAATGTGCATAATGCAACTGATAGAAATGGAAGCAAAGAAATATTAACTACAAATAGCAAAAGATTTCAGCATCGTAGAGATGAGGGTGGATATCTTGTGAACCCATTGCCAGAAATTCAAAGCGATTTGAATGGTCATTCAGGGCAACTTTCGTATAAAATCTCTAAAAACTTTGTTCAAGATGCTGGGAGTGCACAAGGTAACAGTTTCCGCAGATTTGATGGCATTTCATCAACTAGGGAAATACTGAGGAACCAGAATATCAGATCATCCGCGTAG 2052 0.4498 MSSRRHSLSGPPPQLSGTASTHELRQRVITCLNKLSDRDTLAGASLELESIARTLSHDSFSSFLSCIHNTDSSSKSPVRKQCVNLLSLLSRFHGDALSPFISKMIATVLRRLRDPDSVVRSACVDAVAEMSSRITRPSFSVAFLRPFMDALALEQDVNVQIGASLCLAAAIDAAPEPDVESLRRTTLPRLGKLLKTDSCKAKAPLLVLIGSVVSVGGASSRGVMNWLVPCVVEFLGSEDWNVRKASVEVLGKVASVEKDLASQHKVLCLDSLQNKRFDKVKVVRETMNLALDMWKEVKDVSENAPTPVKSPCVSVGTEDGKGLYAAKSSPSVGSKLSQLNKMVPSKRSPPSTVSFKSSGKREIPIKGNDKYSRMGALRQQDHEKLSVENLQTPISKSSHSNMTKEEDIKRCDFESSKSPTYQNVTNSKADVKQVFLNKMSDEKVRKIGGSNSRVVPCDDDDDLNTVVTVNNVNEVCESPQDVEDLSLIREQLLQIENQQSNLLDLLQRFIGTSQTGMNSLETRVHGLEMALDEISYDLAVSSGRIPNTDAIEDMCCKLPGTDFLSSKFWKKTEGRYSTTSRLSFGSSAPINNVHNATDRNGSKEILTTNSKRFQHRRDEGGYLVNPLPEIQSDLNGHSGQLSYKISKNFVQDAGSAQGNSFRRFDGISSTREILRNQNIRSSA 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01739 683 MobiDBLite consensus disorder prediction 1 21 - -
Vivi2g01739 683 SUPERFAMILY ARM repeat 24 292 IPR016024 -
Vivi2g01739 683 MobiDBLite consensus disorder prediction 334 367 - -
Vivi2g01739 683 Gene3D - 14 407 IPR011989 -
Vivi2g01739 683 MobiDBLite consensus disorder prediction 334 358 - -
Vivi2g01739 683 ProSiteProfiles HEAT repeat profile. 227 265 IPR021133 -
Vivi2g01739 683 Coils Coil 488 508 - -
Vivi2g01739 683 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 16 656 IPR033337 GO:0005874|GO:0008017
Vivi2g01739 683 Pfam HEAT repeat 227 256 IPR000357 GO:0005515
Vivi2g01739 683 FunFam ARM repeat superfamily protein 24 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01739 Vivi-Chr2 80281374 80286124 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01739 - - tpra:123906851 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01739 2 80281374 80286124 Vivi2g01739 2 80281374 80286124 ECH