Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01348 ATGGCTGATTCAAAGCAAGGATTGAGGAAGCCGGTGTTTACTAAGGTTGATCAGCTTCGCCCTGGGACGAGCGGACACACCATAACTGTGAAGGTTGTTGATACTAAGATGGTGATGCAGAGAGGTCGGCCTGATGGACCTCAATCCCGTCAAATGCGGATTGCTGAGAGTTTGGTGGGGGATGAGACTGGAGTTATCATAGTTACTGCAAGAAATGATCAGGTGGATTTGATGAAAGAAGGCTCCACTATCATCCTGCGTAATGCTAAGATTGACATGTTCAAAGGCTCAATGAGACTCGCCGTGGACAAATGGGGCCGTATTGAAGTCACAGAACCAGCTACCTTCACTGTCAAGGAAGATAATAACTTGTCTCTGATTGAGTATGAACTGGTGAATGTTGTTGTTGAATGA 414 0.4589 MADSKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDKWGRIEVTEPATFTVKEDNNLSLIEYELVNVVVE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01348 137 CDD SoSSB_OBF 27 110 - -
Vivi2g01348 137 FunFam Uncharacterized protein At4g28440 23 126 - -
Vivi2g01348 137 SUPERFAMILY Nucleic acid-binding proteins 6 135 IPR012340 -
Vivi2g01348 137 Gene3D - 23 126 IPR012340 -
Vivi2g01348 137 PANTHER OS05G0244600 PROTEIN 3 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01348 Vivi-Chr2 57521578 57525038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01348 - - gmx:100526985 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01348 2 57521578 57525038 Vivi2g01348 2 57521578 57525038 ECH